Lactuca sativa (garden lettuce): 111899819
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Entry
111899819 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111899819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111899819
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111899819
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111899819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
111899819
NCBI-ProteinID:
XP_052624582
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All DBs
Position
2:196191366..196193799
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AA seq
327 aa
AA seq
DB search
MAPGGNVYQDVTESRAAIADYSVKSANLEGRNGLRICNSIGGRPGMASNSAVHDLLECPV
CLNIMCPPIHQCPNGHTICVICKTKVQNSCPICRQELGNIRCLALEKVAESIELPCKYHV
YGCQDILAYHSRMRHEEDCKHRGYNCPYAGAECPVTGDIPFIVAHLKTDHNVDMHDGSSF
NHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGAAPVYMAFLRFMGDENDANKF
SYSLEVGGNGRKLKWQGIPRSIRDSHKTVRDSLDGLIITRNIALFFXWWGQAGAEAKSVW
AHMEGTVLSYNLERTVILTDFQVLAQD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggtaatgtttaccaggatgtgactgaatcacgtgctgccattgctgat
tacagtgtcaaatctgcaaatttggaaggaagaaatggcctcagaatatgtaattctatt
ggtggaaggcctggaatggcatcaaacagtgctgttcatgatctactagagtgccctgta
tgcctcaacataatgtgtcccccaattcatcaatgtccaaatgggcacacgatatgtgtg
atttgcaagactaaagttcaaaacagttgcccgatatgtagacaagagcttggaaatata
aggtgtttggctttggaaaaagttgcagagtccattgaattaccatgcaagtaccatgtt
tatggctgccaagatattttagcgtatcacagcaggatgagacatgaagaagattgcaag
catcgagggtataattgtccttacgcaggtgcagaatgtccagtcaccggtgatattcca
ttcattgttgcacatttgaagacagatcataatgttgatatgcatgatggctctagcttc
aaccaccgatatgtgaagcccaatcctcatgagatcgagaatgctacttggatgttgact
attttcaactgctttggataccaattctgcttgcattttgaagcttttcatctgggagca
gcaccggtttacatggcgtttttgcggttcatgggggatgaaaatgatgctaacaagttt
agttacagtctggaagttggaggaaatggtagaaagttgaagtggcaagggatcccgagg
agtattcgtgatagtcacaagactgttcgtgatagtcttgatgggctgattataacaagg
aatatagcattgttctttntctggtggggacaggcaggagctgaagctaaaagtgtctgg
gcgcatatggaaggaacagtcttgagctacaacctggaaagaacagtcatactcactgac
ttccaggttctggctcaagactga
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