Lactuca sativa (garden lettuce): 111899860
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Entry
111899860 CDS
T05352
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111899860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111899860
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111899860
03012 Translation factors [BR:
lsv03012
]
111899860
04131 Membrane trafficking [BR:
lsv04131
]
111899860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111899860
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111899860
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111899860
Translation factors [BR:
lsv03012
]
Eukaryotic type
Elongation factors
111899860
Membrane trafficking [BR:
lsv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
111899860
Exosome [BR:
lsv04147
]
Exosomal proteins
Proteins found in most exosomes
111899860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
FlpD
Motif
Other DBs
NCBI-GeneID:
111899860
NCBI-ProteinID:
XP_023751502
LinkDB
All DBs
Position
2:194588991..194591595
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AA seq
449 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNV
KNVAVKDIKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
QELLTKIDRRSGKELEKEPKFLKNGDAGMVKMMPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAAKKGVK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcatatcagcattgtcgtcatcggacatgtcgactccggcaag
tcaacaaccactggtcacttgatctacaagcttggaggaatcgacaagcgtgtgatcgag
aggttcgagaaggaagctgctgagatgaacaaacgttctttcaaatacgcatgggtgctc
gacaaacttaaggccgagcgtgaacgtggtattaccatcgatattgccctctggaagttt
gaaaccaccaagtactactgcacagtcatcgatgcccccggacatcgtgatttcatcaag
aacatgattactggtacttcccaggccgattgtgccgttctcatcattgactccaccact
ggaggtttcgaagctggtatttccaaggatgggcagacccgtgagcacgctcttctcgct
ttcactcttggtgtgaagcaaatgatctgctgttgtaacaagatggatgctaccacccct
aaatactccaagggtaggtacgaggaaatcgtgaaggaagtgtcttcatacttgaagaag
gtcggatacaacccagacaaaatcccattcgttccaatctctggattcgaaggtgacaac
atgattgagaggtcaaccaaccttgactggtacaagggaccaacccttcttgaagctctt
gaccagatcaacgagccaaagagacccacagacaagccactccgtctaccacttcaggat
gtttacaagatcggtggtattggaactgtgccagtgggacgtgttgagacaggtatcatc
aagcctggtatggttgtgaccttcggaccaacagggttgaccactgaagtcaagtctgtt
gagatgcatcatgaagctttgaccgaagctcttcctggtgacaatgttgggttcaatgtt
aagaatgttgctgtgaaggatatcaagcgtgggtatgttgcctcaaactccaaggatgat
cctgctaagggtgctgccagtttcacttcccaggttatcatcatgaaccaccctggtcag
atcggaaatggttatgctccagtgttggattgccacacttctcacattgctgttaagttc
caagagctgttgaccaagattgacagacgatcaggaaaggagcttgagaaggagcccaag
tttttgaagaatggtgatgcaggtatggttaagatgatgccgaccaagcctatggtggtg
gagactttcgcagagtacccacctcttggaaggtttgctgtgagggacatgcgtcagact
gttgctgttggtgtgatcaagagtgttgacaagaaggacccgactggagctaaggtgacc
aaggccgcagccaagaagggtgtcaagtga
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