Lactuca sativa (garden lettuce): 111899920
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Entry
111899920 CDS
T05352
Name
(RefSeq) two pore calcium channel protein 1B
KO
K16900
two pore calcium channel protein, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111899920
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
111899920
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GFIT
Motif
Pfam:
Ion_trans
EF-hand_7
DUF4006
Motif
Other DBs
NCBI-GeneID:
111899920
NCBI-ProteinID:
XP_023751581
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Position
4:109321567..109330338
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AA seq
737 aa
AA seq
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MDAALLEGESSSRWGVAGGRRAYKSRSDAIAYGSPYQKAAALVDLAEDGSGLPEEILESP
NIESSAKYYFMYIRFDILWTLNYFALVALNFFEKPLWCTSVSEVSCSDREYYYLGELPYL
NNAESLAYEGVTLIILVVHTLFPILYEGVQLYWKSHVNKLKIISLLILVADLIVDILYLS
PVAIYSLPLRIAPYIRVVIFILNIRDLRDSLVILYGMLVTYLNILALSLLFLLFSSWIAY
VIFEDTQQGTTIFVSYSATLYQMFVLFTTSNNPDVWIPAYKSSRSSSLFFILYVLMGVYF
VTNLILAVVYDSFKCELVKQVTEKDRMRTRILKKAFDLIDEKAVGTLDKEQCIDLFEELN
KYRTLPKISKEDFELIFDALDDSRDFKINPQEFNDLCNAIALKFQQEDTEPWLKKFPFYN
SSLSERLKDFVKSPNFGYLVAFILLVNLVAVITETTLDIQNNSGQEFWQKVEFVFGWLYV
VEMALKVYTYGFENYWKDSQNRFDFIVTWVIVIGETATFVSPKEFTFISNGEWIRYLLIA
RMLRLIRLLMHVKRYRAFIATFLTLIPSLMPYLGTVFCVMCIYCTVGIQIFGGLVNAGNP
DLPSTDLADNDYLLFNFNDYPNGMVSLFNLLVLGNWQAWMQSYVILTGTAWTYVYFISYY
LITILLLLNLIVAFVLEAFFAELELECPEDEEEEAGKETGGRGRRNLGTKTRSQRVEMLL
HHMLSAELHEGLPTSDP
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctttgcttgagggagaaagtagtagtcgatggggagtcgcaggaggccgg
agagcttataaaagccgatcagatgccattgcttacggatcgccgtatcagaaggcggct
gctcttgttgatctcgctgaagatggaagtggtctaccagaggaaatccttgagtcaccg
aacattgaatcttctgcaaagtactacttcatgtacattcgctttgacatcctatggacc
cttaattattttgctctcgtagctttgaatttctttgagaaaccattatggtgtaccagt
gtttccgaggtttcttgcagtgacagggagtactattatcttggggagcttccatacttg
aataatgcagaatctctggcatatgagggtgtgaccctcataattcttgtggtgcatact
ctctttcctattttatatgaaggggttcagctctactggaaaagccatgttaataagctg
aagatcatttcactgttgattctggttgctgatttaatagtcgatatcctctatctctct
ccagtggccatctattctcttccattgaggattgcaccttatattcgggtagttatcttt
atcttgaacatcagggacttacgagacagccttgttatcttatatggaatgcttgtcaca
tatctcaatattttggctttatcacttctgtttcttctgttctcgagttggatagcttat
gtcatctttgaagacacccaacagggaactacaatctttgtgtcttactctgctacactg
tatcagatgtttgttctatttaccacatccaacaatccagatgtttggattcctgcctac
aaatcatcaagatcgtcttctctatttttcattctttatgtgcttatgggtgtttacttt
gtcacaaacttgattcttgctgttgtatatgatagttttaaatgcgagctggttaaacaa
gtgactgagaaggaccgaatgaggacaagaatattaaagaaagcctttgatctcattgat
gaaaaggctgttggcactcttgacaaggagcaatgtatcgatttgtttgaagaacttaat
aaatacaggactctgccaaaaatatccaaagaagactttgagttgatatttgatgcattg
gatgacagtcgtgattttaagattaatccacaagaattcaatgatctctgcaatgcaatt
gccttaaaatttcaacaggaggatacggaaccttggctaaagaagttccccttctataat
tcctccttatctgaaaggctgaaagactttgtaaaaagtccaaattttggatatttagtt
gcttttattctcctcgtgaatctagttgctgttattactgaaacaacgcttgatatacaa
aacaactctggtcaggagttctggcagaaggtggagtttgtatttgggtggctatatgta
gttgagatggctttgaaagtttatacatatggatttgaaaactactggaaggatagtcaa
aaccgatttgacttcattgtcacatgggtcatagttattggagaaacagcaacattcgta
tctccaaaggagttcacatttatttcaaatggggagtggattcgttatcttctgattgca
agaatgttgagattgattaggctgttgatgcatgtaaaaagataccgggcctttattgct
acatttttaaccctgataccaagtttgatgccatacctgggtactgtcttttgtgtcatg
tgcatttactgtacagttggtatacagatattcggtggattagtcaatgctgggaaccca
gatttaccaagtacagatcttgctgataatgattacttgttatttaattttaatgactac
ccgaatggtatggtgagtctcttcaatttgcttgtgctgggaaattggcaagcttggatg
cagagttatgtaatattgacgggaactgcttggacctatgtgtacttcatcagctactat
ctaataactattctgctcctcctcaacttgatcgtcgcatttgtgttggaggcattcttt
gctgagttagaactggagtgtcctgaggatgaagaagaagaagctgggaaggaaaccgga
ggaaggggacgccgtaacttgggcacaaagacacggagtcagagggttgaaatgctactt
caccacatgctgagcgcggagctccatgaaggattaccgacttcggatccataa
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