Lactuca sativa (garden lettuce): 111900277
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Entry
111900277 CDS
T05352
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111900277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111900277
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111900277
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111900277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
111900277
NCBI-ProteinID:
XP_023751926
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All DBs
Position
2:171483793..171485340
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AA seq
373 aa
AA seq
DB search
MADRSQNMVRRVQASASMASAGGGQDEAENPMVNRFDNRLPRFSQSAPQQQMFQPSRAPH
RVCPSCTVEEDENVIPLESDSDLGSGGTPMEDVDDDVWIEDDLGQHQNYHSDSGYSSSSP
VSSPIRDPSREIPVVFTDPDVLDCPICLESLRSPIYQCENGHIACSCCCSKSNHKCPSCC
LPIGFNRCRAMEKLVNSITVDCENKKYGCTEPLIYHMKAQHEQVCSHTLCFCPLSSCGFT
GSYTNLYVHFRTHHSSSATPFTFNTTFNINVKRGQKYVILQEQNERVIFILNHDIQGHGR
VFNVDCVGPNEFRAAFGYKLSVRCSETCFSMKSVPEVSGKWEQHTPNNNYLTIPSEILRF
TIELRIKRGFQVW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaagtcaaaacatggtcaggagggttcaagcttcggcctcaatggcgtct
gctggcggcggccaagatgaggcggagaatccaatggtcaaccggttcgataataggctg
ccgcggttctcccaatcggcaccgcagcagcagatgtttcagccatcacgagcgccacac
cgagtctgtccgtcatgtacggttgaggaagacgagaatgtgattccgctggaatccgat
tccgatttaggctcaggagggactccgatggaagacgtggatgatgatgtctggatcgag
gatgatttggggcaacatcagaattaccattctgatagtggatattcgagttctagcccg
gtttcatcaccgatcagagatccaagcagagaaattccggtggtgttcaccgatccagac
gttctcgattgcccgatctgcctcgaatcattacgctccccaatctatcagtgtgagaat
gggcacatagcatgctcctgttgttgctcgaaatcgaatcacaagtgtccttcatgctgc
ttgccgattggattcaaccgatgtcgggctatggagaagctagtcaattcaatcacagta
gactgcgaaaacaagaagtatggatgcacagagccattgatttaccatatgaaagctcag
catgaacaagtatgtagccatacattatgtttctgtcctctttcatcctgcgggtttacc
ggttcttacaccaacctgtacgttcatttccgcacccatcattcatcttctgctactccc
ttcaccttcaacaccaccttcaatattaatgtcaaaagaggtcaaaagtatgtaattctt
caagaacagaatgaaagggtcatcttcatcctcaaccatgacattcaaggacatggaaga
gtttttaatgtggattgcgtaggaccaaacgaatttagggctgcttttggatacaaactt
agtgtgagatgctcggagacatgtttctcgatgaagagtgtacctgaggtgagtggaaag
tgggaacaacatacccccaacaacaactatctaacaatcccatctgagatcttgaggttc
accatagaattacgtataaagagaggttttcaggtctggtga
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