Lactuca sativa (garden lettuce): 111900300
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Entry
111900300 CDS
T05352
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111900300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111900300
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111900300
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111900300
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
111900300
NCBI-ProteinID:
XP_023751952
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Position
2:171315877..171317136
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AA seq
389 aa
AA seq
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MADDRNQNIVRWLQASASMASTGNQDEAEIPIFSRIDNTLPRFFVESALRSQTVQPPRAP
RRVYPSCMVDEAEDVIPLESDSDLGSEATPAGSEDEEEHYFGIEDDEGADGIAEWQHQNH
HANASTPVGLSNSDGGLRSSSLVASPLPVVFTDPDLLDCPICLEPLCAPIYQCENGHIAC
SPCCRKSNLKCPSCYFPIGFNRCRAMEKVIESITVDCKNKAYGCRESLIYHMKAQHEQVC
IHTVCFCPLSSCGYASSSQNLYDHFSTYHSSSATSFTFDTTFDPCLRRGQKYVILQERNE
GVIFILNHEIHGHGRVFHVDCLGSNLFKTAFVYQLSVRCSEACFSMESVAEVWAKWEEHT
PKKNYLTIPSSGYLLFNVEVCIKKAYPVV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacagaaatcaaaacatcgtcaggtggcttcaagcttctgcttcaatggcg
tctactggcaaccaagacgaggcagagattccaattttcagcagaatagataatactttg
ccgcggttcttcgtcgaatctgcactgcgttcgcagacggttcagccaccgcgagcgcca
cgacgagtctatccgtcttgtatggtggatgaagcggaggatgtgattccgctggaatca
gattccgatttgggctcagaagcgactccggcgggaagcgaggatgaagaggagcattat
tttggaatcgaagatgatgaaggggcggacggtatagcggagtggcaacatcagaatcac
catgctaatgcttctactccggtaggactatcaaattctgatggcggattaaggagttct
agcctggttgcatcgccgcttccggtggtgttcaccgatccagacctgctcgattgcccg
atctgcctggaaccattgtgcgccccaatctaccagtgtgagaatgggcacatagcatgc
tccccgtgttgcaggaaatcgaacctcaagtgtccttcatgctacttcccaattggcttc
aatcgttgtcgagctatggagaaagtaatcgaatcaatcacagtagactgtaaaaacaag
gcgtatggatgcagagagtcattgatttaccacatgaaagctcaacatgaacaagtatgt
atccatacagtatgtttctgtcccctttcatcctgcggctatgcgagttcttcccagaat
ctttacgaccatttcagcacctatcattcatcttctgctacttctttcacctttgacacc
acctttgatccttgtctcagaagaggtcaaaagtatgtaattcttcaagaacggaatgaa
ggggtgatcttcattctcaaccatgagattcatggacatggaagggttttccatgttgat
tgcttaggatcaaatttatttaagactgcttttgtgtatcaacttagtgtaagatgctcg
gaggcatgtttctcgatggagagtgtagcagaggtgtgggcaaagtgggaagaacatacc
cccaaaaagaactatctaaccatcccttcttctggatacttgctgtttaacgtagaagta
tgcataaagaaggcttatccggttgtataa
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