Lactuca sativa (garden lettuce): 111900494
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Entry
111900494 CDS
T05352
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00061
Fatty acid biosynthesis
lsv00071
Fatty acid degradation
lsv01100
Metabolic pathways
lsv01212
Fatty acid metabolism
lsv04146
Peroxisome
Module
lsv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111900494
00071 Fatty acid degradation
111900494
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111900494
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lsv01004
]
111900494
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111900494
Enzymes [BR:
lsv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111900494
Lipid biosynthesis proteins [BR:
lsv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111900494
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of breast milk
111900494
Exosomal proteins of breast cancer cells
111900494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
111900494
NCBI-ProteinID:
XP_023752144
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Position
7:complement(177651224..177655548)
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AA seq
727 aa
AA seq
DB search
MDDSEGSLINTPTTEEIAVGGGFLSSLMEDKYSAAVAVIFAIAVPLVLSSMFLGKKKVKQ
RGVPVEVGGEAGFTMRNVRSSKLVEVPWEGATTMAALFEQSCKKHSHYRFLGTRKLVERD
FVTGNDGRKFEKLHLGEFQWETYGQIFERVCNFASGLIRLGHDPDTRIAIFSDTRAEWFI
AFEGCFRQNITVVTIYASLGDDALIHSLNETTVSTLICDSKLLKKVASVSSSLKTVKNVI
YFESDNTEVSTNISDWKVSAFSEVEKLGEASPAPARFPIKKDVAVIMYTSGSTGLPKGVM
MTHGNVVATAAAVMTVVPGLSPSDVYLAYLPLAHIFELAAETVMMTAGASIGYGSALTLT
DTSNKIKKGTKGDASVLKPTLLASVPAILDRVRDGVLKNVEGKGGLTTKLFNLAYKRRLT
SIEGSWLGAWGVEKVFWDALVFKKIRSILGGDIRFMLCGGAPLAADTQRFINVCIGTPIG
QGYGLTETCAGAAFSEFDDPSVGRVGPPLPCGYIKLVSWDEGGYLTSDKPMPRGEVVIGG
HSVTAGYFNNEEKTNEAYKVDETGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYI
SLGKVEAALASSKYVENVMLHADPFHSYCVALVVPAPQVLEQWAKSSGVSYNDYAELCAK
KEAVSEVQQSLSKVGKEAKLDKFELPAKIKLMPEAWTPESGLVTAALKLKREQLKAKFKD
DLQKLYG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcagagggaagtcttatcaatactcctacaactgaagagatagctgttggt
ggtggtttcctctccagtctcatggaagacaaatacagtgctgcagttgcagttattttc
gccattgctgtcccactggttctttcttccatgttcctggggaagaagaaggtgaaacaa
agaggtgttcctgttgaagttggtggtgaggcaggttttaccatgcgaaatgtcagatca
agcaaattagttgaagttccatgggaaggggctacaaccatggctgcactctttgaacag
tcttgtaagaaacattcacattatcggtttctaggtacacgaaagcttgttgaaagagac
tttgtgactggtaatgatgggagaaagtttgaaaagcttcatcttggggaatttcagtgg
gagacatatggacagatattcgaacgtgtttgcaactttgcatctggacttattcgcctt
ggtcatgaccctgatacccgaattgccatcttttctgacacacgagcagaatggtttatt
gcatttgaggggtgtttcaggcagaatataactgttgtaaccatatatgcatcattaggt
gatgatgccctaattcactctcttaatgagacaacagtatctaccttgatctgtgattct
aagctattgaagaaagtggcttcagttagttcaagcttgaaaactgttaagaatgttatc
tactttgagagtgataatactgaagtttccactaacatcagtgattggaaagtttctgct
ttctctgaagttgagaaattgggggaggcaagtcctgctcctgctaggtttcctatcaag
aaagatgttgcagtcatcatgtatacaagtggcagcacaggtttaccaaagggggtgatg
atgactcatgggaatgtagtggcaaccgcagctgcagtgatgactgtggtcccagggctt
tcaccaagtgatgtctacttggcatacttaccattggctcatatattcgaattggctgct
gagactgtgatgatgacagctggcgcatcaattgggtatggttcagcactgacattaaca
gacacatctaataaaatcaagaaaggaaccaaaggagatgcatctgttttgaagccaact
ttattggcatctgttccagctattctagatcgtgtccgtgatggagtattaaaaaatgtt
gaaggaaaggggggtttgactacaaagctttttaacttagcttacaaaagacggttgaca
tcaatagaaggaagctggctaggggcatggggggtagaaaaggtattttgggacgctctt
gtttttaaaaagatacgttccatacttggaggagacattcgtttcatgctatgtggtggt
gctcctttagctgcagatacacaacgctttatcaatgtctgcattgggactccaattggg
caaggatatgggctgacagaaacatgtgctggagctgctttctctgagtttgatgatcct
tctgttggacgtgttggtcctcctcttccttgtggctatattaagcttgtttcgtgggat
gaaggtgggtacttaacatcggacaaaccaatgccacgtggcgaggtggttattggtggc
cacagtgtaaccgctggttactttaacaatgaggaaaaaaccaatgaggcttacaaggtt
gatgaaactggaatgcgttggttttacactggggatatcggaaggtttcaccctgatgga
tgccttgaaatcattgacagaaagaaagatattgtgaaactccaacatggagagtacatc
tctttaggaaaggtggaggcagcacttgcatcaagcaagtatgtggaaaacgtaatgtta
cacgcagaccccttccacagttattgtgtggcgttagtagtccctgcaccccaggttctt
gagcaatgggccaaaagtagtggtgttagttacaatgattatgctgagctttgtgctaaa
aaagaggctgtctccgaggtccagcaatctctctccaaggtaggaaaagaggcgaagttg
gacaagtttgagcttcctgcaaagataaagctgatgccagaagcatggacgcctgaatct
ggattggtgacagctgcactcaagttaaagagggaacaattgaaggccaaatttaaggat
gatctgcaaaaactatacgggtga
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