| Entry |
|
|---|
| Name |
(RefSeq) transcription elongation factor SPT4 homolog 1
|
|---|
| KO |
| K15171 | transcription elongation factor SPT4 |
|
|---|
| Organism |
lsv Lactuca sativa (garden lettuce)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lsv00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111900560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lsv03021]
111900560
03019 Messenger RNA biogenesis [BR:lsv03019]
111900560
Transcription machinery [BR:lsv03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111900560
RNA polymerase I system
111900560
Messenger RNA biogenesis [BR:lsv03019]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111900560
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1:171380614..171382338
|
|---|
| AA seq |
115 aa
MTNAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHERVADCTTPNFTG
IISVMDPARSWAARWLRIGKYVPGCYTLAVSEALSEDLQALCEEERVQYHPPKRV |
|---|
| NT seq |
348 nt +upstreamnt +downstreamnt
atgacgaacgccgcgcaaattccgacgagcttcggccatgaacttcgagcatgtcttcgt
tgccgcctggtgaaaacgtacgatcagtttcgagaatcaggatgtgaaaactgtagtttc
ttcaagatggaggaggatcacgaacgtgtcgctgattgcaccacccctaattttaccggg
attatctcggtaatggatcctgccagaagttgggctgctaggtggcttcgaattggcaaa
tatgttcctggttgctacacacttgcagtctcagaagccctgtcggaggatctgcaggct
ctctgtgaggaagagcgggtgcaatatcatccaccaaaacgtgtatga |
|---|
