Lactuca sativa (garden lettuce): 111900571
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Entry
111900571 CDS
T05352
Name
(RefSeq) tubulin alpha-1 chain
KO
K07374
tubulin alpha
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04145
Phagosome
lsv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111900571
09142 Cell motility
04814 Motor proteins
111900571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111900571
03036 Chromosome and associated proteins [BR:
lsv03036
]
111900571
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111900571
04147 Exosome [BR:
lsv04147
]
111900571
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111900571
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
111900571
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
111900571
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111900571
Exosomal proteins of other body fluids (saliva and urine)
111900571
Exosomal proteins of colorectal cancer cells
111900571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Motif
Other DBs
NCBI-GeneID:
111900571
NCBI-ProteinID:
XP_023752223
LinkDB
All DBs
Position
1:complement(86422838..86426534)
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGVADDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLAFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHALLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISVEKAYHEQLSVPEITNAVFEPAS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGVDDEGEDEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcataagtatacacataggtcaagctggaattcaggttggaaattcatgt
tgggagctttattgcctcgaacatggcattcagcccgatggtttgatgcctagtgacaca
acacctggagttgcagatgatgcattcaacacgttctttagtgaaactggagcaggaaag
catgttccaagagcaatattcgttgatcttgagccaactgtgattgatgaagttagaaca
ggaacttatcgccaactcttccaccctgaacaacttatttctggaaaagaagatgctgct
aataacttcgcaagaggccattacacagtgggaaaggagattgttgatctatgccttgat
cgagtaagaaagttagcagacaactgcactggtttacaagggtttttagcattcaatgct
gttggtggtggaactggttctggactcgggtctttattgttagaacgtttgtctgttgac
tatggaaaaaagtcaaagcttgggttcacaatttatccttctcctcaggtctcaacagca
gtagtggaaccctacaacagtgtcctttcaacacacgcactactcgaacacacagatgtc
gcggttttattagacaacgaagcaatctatgacatatgtaggagatcactagacatcgag
aggccaacatacacgaatttaaaccgattaatttctcaaatcatatcgtctttaacaact
tctcttagatttgatggagcaattaatgttgatattactgagtttcaaacaaaccttgtc
ccataccctcggattcatttcatgctttccagttatgcccctgtgatttcggttgagaaa
gcgtatcatgagcagctttcggtgcctgagattacgaatgcggtgtttgagcctgcaagt
atgatggcaaagtgtgatccgagacatgggaagtatatggcgtgttgtttgatgtatcgg
ggagatgttgttcctaaagatgttaatgctgctgttgcaactatcaaaactaaacgcact
gtgcagtttgttgattggtgtccaactggtttcaaatgtggtataaattaccagccgcca
tcagttgtgccaggtggcgatctagcaaaggtccaacgagcggtttgcatgatcagcaac
aacacagcagttgctgaggtgttttcacgcattgaccataagtttgacttgatgtatgca
aagagggcgtttgttcattggtatgttggtgaagggatggaagaaggagagttctcagaa
gcacgtgaagatcttgcagctcttgagaaagattatgaagaagttggtgctgaaggagtc
gatgatgaaggagaggatgaagagtattaa
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