KEGG   Lactuca sativa (garden lettuce): 111900776
Entry
111900776         CDS       T05352                                 
Name
(RefSeq) tubulin alpha-5 chain
  KO
K07374  tubulin alpha
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04145  Phagosome
lsv04517  IgSF CAM signaling
lsv04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    111900776
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111900776
  09142 Cell motility
   04814 Motor proteins
    111900776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111900776
   03036 Chromosome and associated proteins [BR:lsv03036]
    111900776
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lsv04812]
    111900776
   04147 Exosome [BR:lsv04147]
    111900776
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111900776
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     111900776
Cytoskeleton proteins [BR:lsv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    111900776
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111900776
  Exosomal proteins of other body fluids (saliva and urine)
   111900776
  Exosomal proteins of colorectal cancer cells
   111900776
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 EAD9
Other DBs
NCBI-GeneID: 111900776
NCBI-ProteinID: XP_023752424
LinkDB
Position
1:74473027..74476050
AA seq 450 aa
MREIVSIHIGQAGIQVGNSCWELYCLEHEIQPDGFMTSGESQHSTGDDSFNTFFSETSSG
KNVPRAVFVDLEPTVIDEIRSGSYRQLFHPEQLITGKEDAANNFARGHYTVGKELVDLCL
DRVRKLADNCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVEYGKKPKLGFSIFPSPQVST
AVVEPFNSVLSTHSLLEHTDVVALLDNEAIYDICRRALDIERPSYTNLNRLISQIISSLT
TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAVRAHHEHNTVSEITTAVFEPS
NMMAKCDPRHGKYMACCLMYRGEVVPKDVNTAVGSIKNRRTVQFVDWCPTGFKCGINYQA
PTVVPGGDLAKTRRAVAMISNNTAVAEVFNRIDHKFDLMFAKRAFVHWYVGEGMEEGEFS
EAREDLAALEKDYEEVGQDAEEEGGEEEEE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagattgtaagcatacacatcggccaagccggaattcaggtcggcaattcctgc
tgggagctttattgcctcgaacacgagattcaacccgatggcttcatgaccagcggtgag
tcgcagcatagcacaggcgacgattcgttcaacacgttcttcagcgaaacaagttctgga
aaaaacgttccgagagctgtatttgtggatctggaaccgactgtgattgatgaaatccgc
tccggtagctaccggcaactcttccaccctgaacaacttattaccggcaaggaggacgcc
gctaataatttcgccagaggacattatacagtgggaaaagaacttgttgatctatgtctc
gatcgagttcgaaagttagcagacaactgcaccggtctgcaaggatttatggttttcaat
gcagtgggtggtgggaccggttcgggtttggggtcattacttctagaacgtttatccgtt
gaatatggcaaaaaacccaaactcggtttctcaatctttccatctccccaagtttcaact
gcagttgtcgagccttttaacagtgtgttatcaactcactcactactcgaacatacagac
gttgttgcattacttgacaatgaagcaatatatgatatttgtaggcgagcattggacatc
gaaaggccatcttacacgaatttaaatcgtttgatttctcaaatcatttcatcattaact
acttcattgaggttcgatggtgcaattaatgttgatattacagagtttcaaacgaatttg
gttccatatcctaggatacattttatgctttcttcatatgcacccgtgatctcagctgtc
agagcccaccatgagcataacacagtttctgagatcacgactgcggtgtttgagccgtcg
aatatgatggctaaatgtgacccaagacatgggaaatatatggcgtgttgtttgatgtat
cgtggtgaagtggtcccgaaagatgttaacactgctgtggggtccatcaagaacagacgt
actgttcagtttgtagactggtgcccaacgggtttcaagtgtggaatcaactaccaggca
ccgacagtggttcctggcggtgatcttgcaaagacaaggcgggcagtggccatgataagc
aacaacacggcggtggctgaagtgttcaaccggattgaccataagtttgaccttatgttt
gcaaaaagagcctttgtgcattggtatgtgggtgaaggcatggaagaaggtgagttttca
gaagcacgtgaggatcttgctgctcttgagaaagattatgaagaagttggtcaagatgcc
gaggaggaaggaggagaggaagaagaggagtaa

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