KEGG   Lactuca sativa (garden lettuce): 111900979
Entry
111900979         CDS       T05352                                 
Symbol
RABA1D
Name
(RefSeq) RAB GTPase homolog A1D
  KO
K07904  Ras-related protein Rab-11A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111900979 (RABA1D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111900979 (RABA1D)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111900979 (RABA1D)
   04031 GTP-binding proteins [BR:lsv04031]
    111900979 (RABA1D)
Membrane trafficking [BR:lsv04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    111900979 (RABA1D)
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111900979 (RABA1D)
  Exosomal proteins of colorectal cancer cells
   111900979 (RABA1D)
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    111900979 (RABA1D)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA AAA_22 AAA_16 AAA_14 ABC_tran AAA_24 TniB KAP_NTPase
Other DBs
NCBI-GeneID: 111900979
NCBI-ProteinID: XP_023752614
LinkDB
Position
1:183204851..183211435
AA seq 215 aa
MSGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK
VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRYPTFENVERWLKELRDHTDPNIV
VMLIGNKSDLRHLVAVQTDDAKSFAERESLYFMETSALDATNVETAFAEVLTQIYRIVSK
KAMDAAQDTTLPSKGDKIDVGKEVSAIKSVGCCSS
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtctggatacagagctgaggatgactacgattaccttttcaaggtggttttgattggc
gactccggtgttggaaaatccaacttactttcacgattcactaggaatgagtttagcctc
gagtccaaatccaccatcggtgttgagttcgctacaagaagcttgaatgttgacagcaag
gtcatcaaagctcagatttgggacactgccggacaagaaagatatcgtgcaattacaagt
gcgtactaccgaggagcagtaggagcactgctggtgtacgatgtgacaagatatccgaca
tttgagaacgtggagcggtggttaaaggagttgcgggaccacacggatccaaatatcgtg
gtgatgcttatcgggaacaaatccgatcttaggcacctggtggctgtacaaaccgatgat
gccaaatcatttgcggaaagggaatcactctatttcatggaaacatctgctttagatgct
accaatgtggagactgcatttgcagaggtgcttacacagatatatcggatcgttagcaag
aaagccatggacgctgctcaagatactacgcttccctccaaaggtgacaagattgatgtc
gggaaagaggtttcggctatcaagtccgttggctgttgttcctcttaa

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