KEGG   Lactuca sativa (garden lettuce): 111901058
Entry
111901058         CDS       T05352                                 
Name
(RefSeq) RING-H2 finger protein ATL78
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111901058
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111901058
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    111901058
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_16 zf-RING-like FANCL_C zf_RING_Vps8_fungal Prok-RING_1 zf-RING_4
Other DBs
NCBI-GeneID: 111901058
NCBI-ProteinID: XP_023752693
LinkDB
Position
4:293270976..293271987
AA seq 240 aa
MEFSSKQTLIITHKQLNMSRLSTELFENEMKHFISRKLLLDTYSYQRPAAAVRAPSPSSP
HTEHNNFHANVVMVLSVLLCALICSLALNSIIRCVLRCTGLFRSESSGGQESILVKANTG
IKKKALKSFPTVSYWEGLKLPGLDKECVICLGDFSTGELVKILPKCNHGFHVRCIDKWLS
SHSSCPTCRHSLTETCQKIVTGGNCSIIISSQPQEEGPRNITSLTILPLPHEGLVTNYET
NT seq 723 nt   +upstreamnt  +downstreamnt
atggaattctcatcaaaacaaaccttgatcattactcacaaacaacttaacatgtcaaga
ctgtccactgagctctttgagaatgaaatgaagcattttatttcaagaaaacttctactt
gacacgtactcataccaacgaccagcggctgctgtgagagctccatcaccgtcaagccca
catacagaacataacaactttcatgcgaatgtggtgatggtgctgtcagtgctgctatgc
gctctgatttgttcacttgcgttgaactccattatcaggtgcgtattaagatgcacaggc
ttatttagatcagaaagcagcggtggccaggaaagtattttagttaaagccaacactgga
atcaagaagaaagcattaaagagtttcccaacagtgagctattgggaaggactgaagcta
ccaggattggacaaagaatgtgtgatatgcttgggtgatttttcaacaggagagctagta
aaaatactgcccaagtgtaaccatggatttcatgtgcgttgcatcgataaatggctgagt
tcacattcatcttgtccaacttgcaggcactccttaactgaaacatgtcaaaagatagtc
acaggtgggaactgtagcatcattatatcttcgcaaccccaagaggaaggtccaagaaat
attactagtctgaccatattgcctctaccacatgaaggtcttgtaacaaattatgagact
taa

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