Lactuca sativa (garden lettuce): 111901280
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Entry
111901280 CDS
T05352
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111901280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111901280
03051 Proteasome [BR:
lsv03051
]
111901280
Membrane trafficking [BR:
lsv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111901280
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111901280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBQLN1
UBA
UBA_NBR1_C
Rad60-SLD_2
Ubiquitin_2
Dsc3_N
STI1-HOP_DP
Motif
Other DBs
NCBI-GeneID:
111901280
NCBI-ProteinID:
XP_052625728
LinkDB
All DBs
Position
3:complement(100159217..100162152)
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AA seq
398 aa
AA seq
DB search
MEGGGEANDGDGAVTDGLEVDGSDDVTINIWCSGGIKFVVQVSLDSSVESFKSVIAKSCD
VPAEQQRLVYKGRLLKDDRTLRSYDLEAEQTVHLVRRLPPATVDLSEFTEYQQIQQPGIQ
NLIRINQSTLELLSTHPEALRNVLMNSPRFRELMKRKPAYARIFSDPVIFGAMADFLVIR
ELAARVPGGGGGRSGGVGTRRHPAGTDRSVPPVGLGGLAIPGLERLFRFPSDPIARNQIM
QNPTISQLTQDFLSNPQNMNMILNPRFGEIMQTPVLNSQSQPTSPDTMQKKMALHQSPSY
LLGEQQSTRGESQTSGDTGTQSQPLMNTFNGEKKCMLLTSDVALVNVADSAVGPEEVYAS
ELAQLQAMGFHDTDQNLEALTATKGNILAAVDRLRGGQ
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggaggcgaggcaaatgacggtgacggtgccgtcaccgatggattagaagtc
gacggaagtgacgatgtcaccattaacatatggtgttctggaggtatcaagttcgtcgtt
caggtgagcttggattcgtctgtcgaatccttcaagtctgtgattgcaaaaagctgtgac
gtgcctgcggaacagcagcgtttggtctataaaggccgccttctcaaagacgatcggaca
cttcggagttatgatttggaggcagagcaaactgttcacttggttcgtcgtcttccacct
gctacagttgatttgagtgaatttacagagtatcaacaaatacagcaaccagggattcag
aatctcatccgcattaatcaaagtacgctggaactgctaagcactcatccagaagctcta
cgcaacgtgttaatgaatagtcctcgatttcgtgaacttatgaaaaggaaaccggcttat
gcccgcatattcagtgatcctgttatcttcggtgcaatggctgactttttagtcatccgt
gaattggcagcaagagttcctggtggtggcggcggccgtagtggtggtgttggtactcga
aggcatcctgctgggactgataggtctgtgccacctgttggcttaggtggacttgcgatt
ccaggtttggaacgattatttcgttttccctctgatcccattgcaaggaatcagattatg
caaaatccgactatctcgcagttgactcaggatttcctttcaaacccacagaatatgaat
atgatactcaatcccagattcggagagataatgcaaacccctgtcctcaatagtcaaagt
caaccgacttcaccagataccatgcagaaaaaaatggcattgcatcagtctccttcatac
ctacttggtgagcaacaaagcaccaggggtgaaagtcaaacgagtggagacacaggaact
caatctcagcccttgatgaacacttttaatggagagaagaagtgtatgctattaacctct
gacgtggcacttgtaaatgttgctgactcagcagtgggcccagaagaagtgtatgctagt
gaacttgcacaactgcaagcaatgggttttcatgataccgatcagaatctagaagctttg
accgccaccaaaggtaacattcttgctgctgttgaccgcctacgtggcggtcaatag
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integrated database retrieval system
