Lactuca sativa (garden lettuce): 111901450
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Entry
111901450 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111901450 isoform X1
KO
K23288
syndetin
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111901450
Membrane trafficking [BR:
lsv04131
]
Protein recycling
Others
EARP complex
111901450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
DMP19
Motif
Other DBs
NCBI-GeneID:
111901450
NCBI-ProteinID:
XP_023753068
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Position
2:191108987..191116135
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AA seq
1039 aa
AA seq
DB search
MQPSSFSATPFALIPLAFNHGNLSPEGFELSRFLFLGSLLLSPGGGSGGDGAAGGMDFSK
VGEKFLSSVRSARSLGFLPSTSDRPEVPERAAAAATIARALASIPPHQRHNISSSSKELT
SIYGSEPHDQVLEELEEEFYEEEFDPVQHTLENLPSDENDLPYLEGKAALRLLQLDRVTE
RLSRQVMENHEVMVKGMDLVGELEKDLKVANVICMNGRRHLTSSRNEVSQDLIVNTYSRK
KQNLLDILPVLAALLRAKDMQVELETHVNEENFSKAFQVLSEYLQLLDSLSELSAIQEMS
RGVEIWLGRTLQKLDSLLLGVCQDFKETSFLTVVDAYALIGDVSGLAEKIQSFFMQEVIS
ETHAVLKNIMLEDLEAAEIQSTRLTYSDLCTRIPESEFRKCLLETLSVLFKLMCSYYTIM
SFHSEYKVSMETQKQDDDDASVSESRDDGSEASSSGSGSPWFHLRNDATRHVSQTLQRGL
RNLWQLTTSRVSVLLSSTAVSSTSMHQFLKIYEDLNTFILAGEAFCGTEAVDFRQKLKSI
SENYYLAFHKQNIHALKMVLEKESWFMMPPETIQVVSFAGLVGDGAALTSQTATSANLVK
TRSKQGGFSHWIKTGNPFCSEACEKTNGVSVSVSHKNDSSHSNGDVNYSNGHGHADTSED
ENEDLLADFIDEDSQLPSRISKHKHSKNHSLSEDIRAHTGSSICVLRLMDKYARLMQKLE
IINVEFFKGICQLFGIFFHFVFESFGSQNTNLNYRLKSSLSRISQDCNQWINSPSPPDSL
NKSSFPLMDITPTNPFSTHVPTTSFGLKERCTGADTISLVARLLYKSKPHLQSILLANKS
SIVEEFYSNLVDSVPDLTDQIHRTTAKSLLHISGYVDRIANAKWEVKELGMEHNGYVDLL
LGEFKHYKTRLAHGGIRTEVQDVLIGYGLENISQVLVEGLSRVKRCSDEGRALMLLDLQV
LMTGLQHFVTINVKPKLQSVETFIKAYYLPETEYVHWARAHPEYTKSQMVGLINLVATMQ
GWKRKSRLEVLEKIEAGGV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaagtagtttttcagcaactccatttgctctgattccactcgctttcaatcac
ggaaatttgagccccgagggttttgagctttccaggtttttgttcctaggttcgcttctg
ttatctccaggaggaggcagcggcggcgacggtgctgctggtggtatggatttttcaaag
gttggtgagaagtttcttagttctgtccgctccgcgagatctctcggcttccttccttcg
acttcagatcgtcccgaggttccagaacgtgctgcagctgcagcaaccatagctcgtgca
cttgcttcaatccctccacatcagaggcacaatatctcttcaagctctaaagagctcact
tctatatatggaagtgagccacatgatcaagtattagaagagcttgaggaagaattctat
gaagaggagtttgatcctgttcaacacaccttagagaatctcccatctgacgaaaatgat
cttccatatctcgaggggaaggctgctctaagattattacaactggatagagtaacagaa
agattatcacgccaagtgatggagaatcatgaagtaatggtgaaaggaatggatttggta
ggtgagctggagaaagacttgaaggttgcaaatgtcatttgcatgaatgggagaagacac
ctcacttcttcacgaaatgaggtatcacaggacctcattgttaacacatattctagaaag
aaacaaaatcttctggacatacttccagttttagcagcacttcttcgtgcaaaggacatg
caagtagaacttgaaacccatgtcaatgaagaaaatttctctaaggcattccaggtgttg
tctgagtacctccaacttctggatagcttatcagagctttcagctatacaagagatgagt
cgtggtgtggagatatggcttggaagaactctacagaaattggattcacttttattgggg
gtgtgtcaagactttaaagaaacaagctttttgactgtggttgatgcttatgcattgatt
ggtgatgtttctggtcttgctgagaagatacaaagcttctttatgcaggaggttatatct
gaaacacatgcagtccttaagaacatcatgctagaggatcttgaagctgctgaaattcaa
agcactaggctcacatacagtgatctttgcactcggatacctgaatccgagtttaggaag
tgtttattggagactctatctgtcctcttcaaattgatgtgctcatattacacaattatg
agtttccattcagagtataaggtttccatggagacacagaaacaagatgatgatgatgca
tctgtttcagaatcaagggatgatggaagtgaagcttcaagcagtgggagtgggtcccca
tggtttcaccttcgaaacgatgccacacgacatgtttcacaaacattacaaagaggtctt
aggaatctttggcaacttacaacaagtcgtgtctctgtattactctcttctactgcagtt
tcttccaccagcatgcatcagtttttaaaaatatatgaagatctcaacaccttcatcttg
gctggagaggctttttgtgggactgaagcagttgactttaggcagaaactgaaatccatt
tctgaaaactactatcttgcttttcacaaacaaaatatacatgctctgaaaatggttttg
gaaaaggagagttggttcatgatgccaccagagacgattcaggtagtgagttttgcaggc
cttgttggtgatggagctgcgttgacaagtcaaactgccacctcagctaatttagtaaaa
accagaagtaaacaaggtggattctcacattggattaaaactgggaatccgttttgttca
gaagcatgtgaaaaaaccaatggggtatctgtatcagtatctcacaagaatgattcttca
catagtaatggtgatgtaaattacagcaatggccatggtcatgctgatacttctgaagat
gaaaatgaagatcttcttgcagattttattgatgaggatagtcaactaccaagtcgtatt
tctaagcacaaacattcaaaaaatcactctttatctgaagatattagagcacacacaggg
tcatcaatatgcgttctcaggctgatggataaatatgcaaggctaatgcaaaaactagag
ataatcaatgttgagtttttcaaggggatctgccagttgtttgggatctttttccatttt
gtgtttgaaagctttggttctcagaacaccaatcttaattatcgtcttaagtcgagctta
tccagaatatctcaagattgcaatcagtggataaattccccatctcctccagactcgtta
aacaagtcatcatttcctcttatggacatcacacctactaatccattttctactcatgtc
cccaccacctcttttggcctcaaggaaagatgcacaggagcagacactatatctcttgtt
gctcgattattatacaagtccaagcctcatcttcaatcgatacttttggcaaataaatcc
tcaatcgttgaagaattttattcaaatttggtggattcagttccagatctgacagaccaa
atccatagaacaactgcaaaatcgcttcttcatattagtgggtatgttgatagaattgcg
aatgctaaatgggaagttaaagagcttggaatggagcataacgggtatgttgatctttta
ttgggagaatttaagcactacaaaacaagattagctcatggaggcatccgaacagaggtt
caagatgtgttaataggatacggacttgaaaatatttctcaagttttagtcgaaggactc
tccagagtcaaacgctgttctgatgagggtcgtgccctcatgttattggatcttcaggtt
ttgatgactgggcttcagcattttgtgacgattaatgttaagccaaagttacagagtgta
gaaacttttatcaaggcatattaccttccagaaactgaatatgtgcactgggcacgtgct
catccggaatacaccaagagtcagatggtggggctaataaaccttgtggccacaatgcaa
ggttggaaaaggaaaagtagattggaagtgttggaaaagatagaggcaggaggagtgtaa
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