Lactuca sativa (garden lettuce): 111901479
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Entry
111901479 CDS
T05352
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111901479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111901479
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111901479
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
111901479
NCBI-ProteinID:
XP_023753118
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Position
2:192548636..192552377
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AA seq
709 aa
AA seq
DB search
MSYANSRSVRFQDDGGLSKLPSTNKDNLFKIKYNIDNKQVSDQRTEENESGGSSLKSKVL
SRVFSEDYERVKKKIFDPRGLAIRKWNNIFLFACLISLFVDPLFFYLPSVRTKNVCIHIG
LNLEISLTIVRSIADVFYMIHIYIRFSTAYVAPSSRVFGRGELVIDSSKIAKKYIRGGFL
IDVIAALPLPQMLIWLIIPSLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLTSEIVGATG
VITETAWAGAAYNLMLYMLASHFLGASWYVLSIERQEACWRHACLLEDPHCQDKFFDCET
FGDNKRQIWFNSSNVSTQCVPTSGFYQFGIYGEALTSNVTSALFFNKYFYCLWFGLKNLS
SLGQNLLTSTYVGEIIFAIIIAIVGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQW
MRHRQLPPELRESVRRYDQYKWVATRGVDEESLLKDLPLDLRRDIKRHLCYDLVRRVPLF
DQMDGRMLDAICERLKPALCTQGTCLVREGDPVDKMLFIIRGNLDSYTTNGGRTGFFNSC
RIGPGDFCGEELLTWALDPRPSVVIPSSTRTVKAISEVEAFALIAEDLKFVASQYRRLHS
KQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRQNASELRARESFTSVDYESEVNSPAHVS
QMVSPEPRLSGYRASTRRSGNLHSVSGTKSSSGSSLQKPTEPDFSVDEE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgccaattcaagatctgtaagatttcaagatgatggtgggctatcaaaactt
ccatccacgaacaaagacaacttatttaagatcaaatacaatattgacaacaagcaagtt
tctgatcaaagaacagaggaaaatgaaagtggggggtcttcattaaaatcaaaagttctt
tcaagagttttctctgaagattacgagagagttaaaaagaaaatctttgatcctcgaggc
ttagcaattcgaaaatggaacaatattttcttgttcgcttgtttaatctctttgtttgta
gaccctttattcttttaccttccatctgttcgaacaaaaaacgtttgcatccatattgga
ttaaacctggagatcagtctcaccatagtaagatcaatagccgatgttttttacatgatt
catatttacattagattttctactgcctatgttgcaccatcttcccgtgtttttggaaga
ggcgaactcgttatagattcttccaagatcgctaaaaaatacatacgaggtggttttttg
atcgatgtcatcgccgccttacctcttcctcagatgttaatctggctcattataccgagt
ttaagtggctcaaccatggctaacacgaaaaacgttcttcggttcatcatcatctttcaa
tatctccctagactttatcttatattccctttaacatcagaaattgttggggctacgggt
gttataactgaaactgcatgggctggagctgcatataatcttatgttatacatgttagca
agccattttttaggggcttcttggtatgttttatcgatagagagacaagaagcttgttgg
agacacgcatgcctacttgaggatccacattgtcaggataaattctttgactgtgaaaca
tttggcgacaataagagacagatttggttcaattcaagtaacgtctcaacacaatgtgtt
ccaacaagcgggttttatcaatttggtatctatggtgaagctttaacatcaaatgttact
tctgcgttgtttttcaacaaatacttctactgtctttggttcggtttaaagaatcttagt
tctttagggcagaatttgttaacgagtacttacgtcggggaaatcatttttgcgatcata
atagcgattgtggggctagttctgtttgcgttgttgatcggaaatatgcagacatatctt
caatcgacgacagttagattagaagaatggagggtccggcgaactgatacagaacaatgg
atgcgtcatcggcagttgccaccggaactccgggaatctgttcggagatacgatcaatac
aaatgggtagctacacgaggggttgatgaagaatcgcttctcaaagatcttcctttagat
ctccgacgagatatcaaacgacacctttgctatgatctagttcgacgagttccgttgttt
gatcaaatggacggaaggatgttggatgcgatctgcgagcgattaaaaccggcgctgtgt
acgcaaggcacgtgtttggttagggaaggtgatcccgtggacaagatgctatttataatt
agaggaaacctagattcctacaccacaaacggcggccggacagggtttttcaattcatgc
cgaataggtccaggtgacttttgcggcgaggagcttctgacgtgggccctggacccacgg
ccgagtgtcgtgattccgtcatcgactagaaccgtgaaggcgatttccgaagtggaagct
tttgcgctcatagcggaggatctaaagtttgtggcgtcgcagtatcggagattgcatagt
aagcaattgcggcataagtttaggttttatagccaccagtggcggacttgggcggcgtgt
tttgtgcaggcggcatggagaaggtataaacggaggcaaaatgcaagtgaacttagggct
cgagagagttttacgagtgttgattatgagtcggaagttaattcgccggcgcatgtcagt
caaatggtttcaccggagccgaggttgagtgggtatcgtgcgagtacaaggaggtcaggg
aacctgcactcggtctcagggacgaaatcaagtagtggtagctcattacagaaaccaaca
gaacctgatttttctgtagatgaagaataa
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