KEGG   Lactuca sativa (garden lettuce): 111901591
Entry
111901591         CDS       T05352                                 
Name
(RefSeq) RNA polymerase sigma factor sigA
  KO
K03086  RNA polymerase primary sigma factor
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111901591
Transcription machinery [BR:lsv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     111901591
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Cap4_nuclease
Other DBs
NCBI-GeneID: 111901591
NCBI-ProteinID: XP_023753232
LinkDB
Position
9:66815732..66819460
AA seq 486 aa
MMSTTAIGLRATNSLLGSSYFYSDTTEKFSCNGDISFTFVTTKNTITAKKQSNYSHSLTS
KRDTDSHSIRALKQHVATSSDPSISTDQWVQRFHHLEDKSSEQELPVEALLLLQSFLEKQ
WKLPTEKNTNTTTDTPTEKDSKKIHIISSQISARKRRIEARKKTPNSCSEIGSELLQNQF
KGHVKGVRSEGLLTQSEVIILSKKIKIGLRLEEQKSRLKEKLGYEPSEGQLASSMRISRM
DLRKKQIESTLAREKLAMSNVRLVMSIAKRYDNMGAQMADLIQGGLIGLLQGIKKYDSSR
GFKISTYVYWWIRQGVSRALIENSKILRLPTHLHERQSAIRNAKAKLEEQGITPSIDRIT
ESLNISRKKVINATQAITKVFSLDNPGQTLDSDIADNCMENDPWHGVDEAALKYEVNKLI
NMTLGERERDIIRLYYGLDKECLYWEDIGKRIGLSRERVRQIGLVALEKLKHAARKNGLE
EMLVKH
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgatgtctacaactgcaattggactaagggcaacaaatagcctcttgggttcatcctat
ttttactcagatacaactgaaaaattctcctgcaatggtgatattagcttcacatttgtc
actacaaagaacacaatcactgcaaagaaacaatccaactacagccatagtcttacatcc
aaacgagatacagattcccattccataagagctttaaaacaacatgtagctacttcttct
gatccttcaatctctacagaccaatgggttcaaagatttcaccacttggaagacaaaagc
tctgaacaagaacttcctgttgaagctttactacttttacaatctttcctggagaagcag
tggaaacttccaaccgagaagaatacaaatacaactacagatactcccacagaaaaagac
agcaaaaaaatacacatcattagctcacagatatctgcacgaaagcgtagaatagaagca
aggaagaaaacaccaaatagttgctctgaaattggttcagagctccttcaaaatcaattt
aaaggtcatgttaaaggggtaagaagtgaaggacttctcactcaatcagaggtgatcatt
ctatcaaagaaaatcaaaatcggtttacgcttggaagagcagaaatcaagactgaaggaa
aaattgggatatgaaccttcagaagggcaacttgcaagttccatgaggatttcaagaatg
gacttaagaaaaaaacaaattgaaagcactttggcaagagagaagcttgcaatgagcaat
gttcgtttagtgatgtctattgcaaaaagatatgataacatgggagctcaaatggctgat
cttattcagggaggtctaattggactacttcaagggataaaaaagtatgattcatcaaga
ggtttcaagatttctacctacgtttattggtggatacgacagggtgtttcaagagctctg
attgagaattctaaaatcctaagattacctactcatttgcatgaaagacaaagtgcaatc
cggaatgccaaagccaaactagaggaacaaggaataactccatcaattgatagaattaca
gaaagtctgaacatatccagaaaaaaagttataaacgcaactcaggcaatcactaaagta
ttctcacttgataatcctggacaaacactggatagtgacattgcagataattgcatggaa
aacgacccatggcatggagtagatgaagcagctctcaagtatgaagtaaacaagctcata
aacatgactctaggggaacgcgagagagatatcattcgtctttactatggtcttgacaag
gaatgcctttattgggaggatattggtaaaagaatagggttatcgagggaacgtgttagg
caaattggacttgttgcattagagaaactaaaacatgctgcaagaaagaatggacttgag
gaaatgttggtgaaacattaa

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