Lactuca sativa (garden lettuce): 111901689
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Entry
111901689 CDS
T05352
Name
(RefSeq) ABC transporter B family member 28 isoform X2
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111901689
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111901689
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
111901689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_29
AAA_21
AAA_16
AAA_5
AAA_30
Zeta_toxin
AAA_25
AAA_15
Motif
Other DBs
NCBI-GeneID:
111901689
NCBI-ProteinID:
XP_023753344
LinkDB
All DBs
Position
9:complement(71549216..71555565)
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AA seq
714 aa
AA seq
DB search
MTSLSLLLPLHPPLHNHRRQLLFLRGQRRPTSSLPPLRQQQLRLTSTRNKSSLITAAGYI
TGPASDAIVAAEDPKVEESDSSPEPVQRFNAISLGLLLRLLSRHKLRVAASIVSLVCCTT
CTLSMPILSGRFFEVLIGARSEPLWQLLSKVGVLYTLEPIFTVIFVVNMNTIWEKVMSSL
RAQIFGSVLIHKVEFFDRYKVGELTALLTSDLGSFKNIVSENISRDRGFRALTEVVGTMC
LLFVLAPQLAPILGVLMLAVSTLVAVYKRSTVKVFKAYGLTQASIADCITETFSAIRTVR
SFGGEKRQMSMFGNQVLSYQSSGIKLGVFKSINESITRVAVYVSLMALYILGGNKVKAGE
MSVGTVASFIGYTFTLTFAVQGLVNTIGDLRGAFAATERINSILSSSEIDQALAYGLQKD
IIQEKEGINNNLNMFLLNDQNDKRGSQNTRYMSSLTSGNSVRVLAQSGDICLEDVHFSYP
LRPDVEVLNGLDLTLKCGSVTALVGSSGAGKSTIVQLLARFYEPTQGRISVGGEDLRTFD
KSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSRDDVIAAAKAANAHDFIISLPEGY
DTLVGERGGLLSGGQRQRVAIARALLKNAPILILDEATSALDTVSERLVQDALNQLMKGR
TTLVIAHRLSTVQNADQIALCSQGKIAELGTHSELLAKKGDYASLVCSQRLAFE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctctccctcctcctccctctccaccccccacttcacaaccaccgtcggcaa
ctccttttcctccgtggacaacgccgacctacctcttcgttgccgccactccgtcagcaa
caacttcgtctaacttccactcgcaataaatccagccttatcaccgccgcaggttacata
acaggtccggcctcggatgcaatcgtcgccgccgaggatccgaaggtagaggaatccgat
tccagtcccgaaccggtacaacggtttaatgccataagtttgggcttgttgttgaggctt
ctgtcccgccataagcttagagttgcagcttcgatcgttagcctcgtatgctgtaccact
tgcactctttcaatgccgattttatccgggaggttttttgaggtactaataggggcaaga
tcggagcctttatggcagcttcttagcaaggttggagttctatatacattggaaccgatt
ttcacagttatatttgttgtgaatatgaacacgatttgggagaaggttatgtctagctta
agagctcaaatatttggcagcgttttgattcacaaggtggaattctttgacagatacaag
gttggcgaactcactgctttattgacatctgatttgggttcttttaagaacattgtgagt
gagaacatttcaagagatcgaggtttcagggcactaactgaggttgttgggacaatgtgc
ttactgtttgttcttgcccctcaacttgcaccaattttgggtgtacttatgcttgcagta
tctactttagttgctgtatacaaacgatcaactgtgaaagtatttaaagcctatgggttg
actcaagcttcaatagccgattgtatcactgaaaccttttctgccatccgtactgtaagg
tcattcggaggagaaaaacgtcaaatgtcaatgtttggcaaccaggttctttcttatcaa
agcagtggcatcaagcttggagtgtttaaatctatcaatgaatcaataactagagttgca
gtgtatgtatctttaatggctttgtatattcttggaggaaacaaagtgaaagcgggtgag
atgtcagtgggaactgtggcttctttcattggatacactttcacattaacatttgctgtt
caaggacttgtgaacacaattggggatttaaggggagcttttgcagctacagaaagaatc
aactctatcttatctagctcagaaatcgatcaagccttagcttatggtttacaaaaagac
atcatacaagaaaaagagggaataaataataatttaaatatgtttttgttaaatgaccaa
aatgataaaaggggatctcaaaacacaaggtacatgtcatccttaacatcaggaaacagt
gttcgtgttcttgcacaatctggtgatatttgtcttgaagatgtgcatttttcttatcca
ttgaggcctgatgtggaagtacttaatggccttgatttgactttaaaatgtggaagtgtt
actgctttagtggggtccagtggtgctggaaagagtactattgtacagctattggcaagg
ttttatgagccaactcaaggcaggatatcagttggaggagaagatttaagaacatttgat
aaaagtgaatgggcccgtgtagtctcgatagtcaatcaagaacctgttcttttctcggtt
tctgttggagaaaacatcgcgtatggccttccggatgaaaacgtgtcaagagatgatgtc
atcgcagccgccaaagccgccaatgctcatgatttcattatctcactcccagagggatat
gataccctggttggtgaaagaggaggattgctaagcgggggtcaaagacagagagttgct
attgcaagggcactcctgaaaaacgctcctatattgatactcgatgaggcaacaagtgct
ttggatacagtgagtgagcgattagtccaagatgccctcaaccaattaatgaaaggaaga
acaacattagtgattgctcatagattaagcacagtacaaaatgcggaccaaattgccctt
tgttctcaaggcaaaattgcagagttggggactcattccgagttattggctaaaaagggc
gattatgcttctcttgtttgctcacaaaggcttgcatttgagtga
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