Lactuca sativa (garden lettuce): 111902113
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Entry
111902113 CDS
T05352
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111902113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111902113
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111902113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
PUB
Motif
Other DBs
NCBI-GeneID:
111902113
NCBI-ProteinID:
XP_023753757
LinkDB
All DBs
Position
8:276833850..276836189
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AA seq
381 aa
AA seq
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MFGAQASSSPFGTPSAMPAFGTPSSTFGTPASTPAFGTPSSTPAFGTPSTPSFATGFGTS
LFSTPFSQQQQQQTSPFQQQSSSPFGFSTPFGATTQSNVNPFGQTTPAATPFNAQLTTQM
APVAQLPFSLADRDIQAILDAYKDEITNPKYAFKHLLFSVTEPQLRTKPAGVSDIMWAEA
MGKLEGMESSNRERLWPQLVKGFKDLSERLKLQDEVILSDAERLQMTQTNVKVLQRHFQA
DTFPRIERLRQSEKALQRRLLRLMRILEALEAKGFRLPLTKGEVELAEKLAAIIRQLKGS
GAELSRRVQNLLTVARVQANGHGGSSVFLPGSTKIHEQSLSDMHEVLQQQTEAVGRLGNV
LKRDIRDMEIIMAEDTQMADV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaggcatcttcctccccctttggcactccgtccgccatgccagcattc
ggcactccatcctccacctttggcactcccgcatccacccctgcatttggcaccccttcc
tcaacgccagccttcggaacgccgtcaacgccatcatttgccacaggcttcggtacatca
ctcttctccactcctttctctcagcaacagcagcaacaaacgtctccgtttcagcaacaa
agctcaagccctttcggattttcgactccgtttggggcaacgacgcaatccaatgttaat
cctttcgggcagacaacccctgctgcaacgccgtttaatgctcagttaaccactcagatg
gctcccgtagcccagcttccattctcccttgctgatcgagacattcaagcaatacttgat
gcgtacaaggatgaaattactaaccctaagtatgcgttcaagcacttgctgttcagtgtg
actgaaccacaacttaggacaaagcctgctggtgtatcagatataatgtgggcagaggca
atgggcaagctagaaggtatggaaagttccaaccgtgaacgtctttggccccaacttgtt
aagggtttcaaagatctttctgagcgcttgaagcttcaagatgaagtcatactttcagat
gctgagagattgcaaatgactcaaaccaatgtgaaagtgcttcagaggcatttccaagct
gatacttttcctagaatagagagactgagacaatcagagaaagctctacaaaggcgcctc
ttaaggttaatgagaatattggaggcattagaggccaagggatttcggttgcctttgacc
aaaggagaagttgaattagccgagaagctggctgctataatcagacagttgaaaggatct
ggagctgaactctcgaggcgggttcagaatctgctgactgtagctcgtgttcaagcaaat
ggtcatgggggtagttcagtctttttaccgggatctaccaaaattcatgaacagagtctt
tcagatatgcatgaggtattacaacagcaaacggaagcggttggtaggttgggaaatgtg
ttgaagagagacatacgagatatggaaattataatggcagaggacactcaaatggcagat
gtgtag
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