Lactuca sativa (garden lettuce): 111902200
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Entry
111902200 CDS
T05352
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111902200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111902200
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111902200
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
U-box type E3
111902200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-C3HC4_2
Arm_2
MLKL_N
zf-C3HC4
KAP
HEAT_EZ
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
111902200
NCBI-ProteinID:
XP_023753823
LinkDB
All DBs
Position
9:complement(26699555..26703360)
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AA seq
649 aa
AA seq
DB search
MAEGGKGGVVLKLIDLVSEISLISDYRCTVRKPFFNLARRLKLLSPLFEEIRDIKDPLPD
ESYRSLLSLMEALESAKELLRLGSQASKIYLALEREEIMKKYQDVTERLEQDLDGICFEK
LDISDEVKEQVALVVAQFRRAKGKNDTPDVELTDDLSSLYNKGNDVVADPDVLKRLVEKL
QLTGINDLTHESITLHEMVSASDGDPGESIEKMSMLLKHIKDFVQTDNPSTQDSHSPPPG
ADSSTSNPPKPNSKTTLIPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLEQGHQTCP
KTQQNLTSTALIPNYVLRSLIAQWCETNGMDPPKRSARSSSSSSSSSSACTPAERSMINT
LLTKLKSVSPDDQRAAAAEIRLLAKRNADNRVAIAEAGAIPLLTNLLTAPDSRTQEHAVT
ALLNLSICEDNKGNIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSLG
AIPPLVVLLSEGTQRGKKDAATALFNLCIYQGNKGRAVRAGVILTLMELLTEPQGGMKDE
ALAILAILSSHAEGKAGIGKADAVPVLVEFIRSGSPRNKENAAAVLVHLCSGDHKYLVEA
QELGVMEVLVDLLHHGTDRGKRKAGQLLEKINRYTEQHKLLGQSNLPLP
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggagggaaaggcggggtggtattgaagctgattgatctcgtgagcgagata
tcactgatatcggattataggtgtacggtgaggaagccgtttttcaatttagctcgaaga
ttgaagcttttgagtccgttgtttgaagagattcgtgatattaaagaccccctccctgat
gaatcctatcgatcgttgctttcgttaatggaggctttggaatctgctaaagagttgctt
cgattagggagtcaagccagcaagatttatctggccctagagagggaggaaatcatgaaa
aaatatcaagatgtaacagagcgtttggaacaagatttagatggaatttgtttcgagaag
cttgacatatcagatgaagtaaaagaacaggttgcgttagttgttgctcaattccgaaga
gccaaaggaaaaaacgacacgccagatgtcgaactaactgatgacctgtcatccctctac
aacaagggcaatgacgtggtggcagatccagatgtcctaaaacgattagttgaaaaacta
caactcaccggaataaacgatctcacacacgaatcaataacactccatgaaatggtatcc
gcaagtgatggagacccaggcgaatccatagagaaaatgtcaatgctccttaaacacatc
aaagatttcgtccaaaccgacaatccttccacccaagattcacattcaccccctcctgga
gccgattcctccacttccaaccctcccaaaccaaattccaaaactacccttattccagat
gacttccgttgccctatttcactcgagttaatgaaagaccccgtcattgtctcaaccgga
cagacttacgagcgaacatgtattgaaaaatggctagaacaagggcaccaaacatgtcca
aaaacacaacaaaacctaacaagcactgctttaatcccgaactacgtcctacgaagccta
atcgcgcaatggtgcgaaacaaacggaatggacccaccgaaaagatccgccaggtcatca
tcatcgtcgtcatcatcatcctccgcgtgcacgcctgcggaacgttccatgatcaacacc
ctcctgacgaagctaaaatcggtcagcccggacgaccaacgggccgccgcggccgaaatc
cgtctcttggcgaaacgaaacgcggacaaccgcgtcgcgatagcggaagccggcgcgatc
ccgctcctcacgaatttgctaaccgcgccggattcgcgcacccaggaacacgcggtgacc
gcgcttttaaacctctcgatctgcgaagacaataaaggaaacatcgtgtcgtctggcgcg
gtcccggggatcgttcatgttcttaaaaaaggtagcatggaagcgagggaaaacgcagcg
gcgactctttttagtctttcggtgatcgatgaaaataaggtgacaatcggatcattaggg
gcaatcccgccgcttgtggtgttgttaagtgaagggacacaaagagggaaaaaggatgcg
gcgactgcgttgtttaatttgtgtatatatcaagggaacaaagggagggcggtgagggcg
ggtgtgattttgactttgatggagcttttgactgagccacaaggcggaatgaaagatgag
gcgttggcgatattggcgatactgtcgagtcatgcggaagggaaagcggggattgggaaa
gcggatgcggtcccggttttggttgagtttattaggagtgggtccccgaggaataaagag
aatgcagcggcggttttggtgcatttgtgttcgggtgatcataagtatttggtggaggcg
caagagcttggagtaatggaggttcttgtggatttgcttcatcatgggacggataggggg
aagagaaaagcaggacagttgttggagaagattaacagatacaccgaacaacacaagttg
ttgggtcagagtaacttacccttaccctga
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integrated database retrieval system
