KEGG   Lactuca sativa (garden lettuce): 111902263
Entry
111902263         CDS       T05352                                 
Name
(RefSeq) chaperone protein ClpB1
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lsv03110]
    111902263
Chaperones and folding catalysts [BR:lsv03110]
 Heat shock proteins
  HSP100
   111902263
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_22 AAA_16 Sigma54_activat AAA_14 nSTAND3 AAA_7 AAA_18 IstB_IS21 bpMoxR RuvB_N AAA_28 ATPase_2 RNA_helicase NBD_SMAX1 TsaE TniB NACHT Mg_chelatase AAA_24 DNA_pol3_delta2 AAA_33 AAA_25 DUF815 Zeta_toxin Roc T2SSE ResIII ABC_tran AAA_19 DUF2987 DUF87 DASH_Spc19
Other DBs
NCBI-GeneID: 111902263
NCBI-ProteinID: XP_023753883
LinkDB
Position
4:complement(205390171..205393787)
AA seq 915 aa
MNPDKFTHKTNEALASGHELAMNAGHAQFTPLHIAAALISDHNGIFRQAINNAGGEEAGN
SADRVFNQALKKLPSQSPPPDEVPASTSLIKTIRRAQSSQKSRGDTHLAVDQLILGILED
SQISELLKEAGVGASRVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILRGDVPSNLADVRVIA
LDMGALIAGAKYRGEFEERLKAVLKEVEDAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVLVAEPSVPDTISILRGLKERYEG
HHGVRILDRALVVAAQLSSRYITARFLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLMMKYKKEKERIDEIRRLKQKR
EELLVALQEAERRYDLARAADLKFGAVQEVETAIAKLEGTTDENVMLTETVGPDQIAEVV
SRWTGIPVTRLGTNEKERLIGLSDRLHQRVVGQDQAVNAVAEAVLRSRAGLGRAQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDEKLMIRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHQSVFNTLLQMLDDGRLTDGQGRTVDFTNTVIIMTSNL
GAEYLLKGLSGKTTMEKAREMVMGEVRKHFKPELLNRLDEIVVFDPLSHDQLRKVARLQL
KDVAVRLAERGVALGVTEGALDVILNQSYDPVYGARPIRRWLERRVVTELSKMLIREEID
ENSTVFIDAEMNGEELSYRTERNGGVVNAATGEKSDVLIHVVNTNANGGARSDAAQAVKR
MKIEEVDDDDEMDDE
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgaatcctgacaaattcacccacaagacaaatgaagctttggcttcaggtcatgaactc
gcaatgaatgctggacatgctcagttcacaccgctacacatcgcagcagctttaatttct
gaccataatggaatattccggcaagcaataaacaatgccggtggtgaagaagcgggtaat
tcagcggatagggttttcaatcaagcgttgaagaaactcccttcccaatcccctccccct
gatgaagttccagcaagtacttctctaatcaagacaattcgtcgcgcccaatcttcacaa
aaatcccgtggtgacacccatttggctgttgatcaattgattttgggcattcttgaagat
tcccaaatttcagaacttttaaaagaagctggagttggtgcatcgagggtgaaaagcgag
gtagaaaagcttcggggtaaagaagggaagaaggtggaaagcgcttcaggggatactaat
ttccaagctctcaagacatatggtcgtgatcttgtagagcaagccgggaagcttgatcct
gtaattgggagagatgaggaaattaggagagtgattaggattttatcaagaaggactaag
aacaatcctgttcttattggtgaacctggtgtgggaaaaactgctgttgttgaaggatta
gctcaaaggattcttagaggagatgtcccaagtaatcttgctgatgtgagagttatcgca
ttggatatgggagctttaattgctggagccaagtatagaggggagtttgaggagagactg
aaagcagttttgaaagaagtggaagacgctgaagggaaggtgatattattcattgatgaa
atccaccttgttcttggagcgggtcgcacagaaggatccatggatgctgcaaatctgttc
aagcccatgcttgctaggggtcaactccggtgcattggtgcaactactttggaagagtat
aggaaatatgtggaaaaagatgctgcttttgagagacgtttccagcaggttttggtggct
gaaccaagtgttcctgacaccataagcattcttagagggttgaaagagagatatgaaggt
catcatggtgttaggattcttgatcgtgctcttgttgttgctgctcaactttcaagccga
tacataactgcacgttttctgcctgataaggctattgaccttgtggatgaggcctgtgca
aatgttagggttcaacttgatagtcaaccagaagaaatagacaatcttgagaggaaaagg
atgcaattagaagttgagcttcatgctttggagaaagaaaaagacaaagcaagcaaagcg
cgtcttgttgaagtgaaaaaggagcttgatgacttgagagataagcttcaaccactgatg
atgaaatacaagaaggaaaaagaaagaattgatgaaatccgcagactgaaacagaaaagg
gaggagcttttggtggcactacaagaagcagaaagaagatacgatttagcaagagctgca
gatttgaaattcggagcagttcaagaagtggaaacagcaatagcaaaactcgaaggaaca
acagatgaaaatgtgatgttgacagaaacagtgggacccgatcagatagctgaggtggtg
agtcgatggaccgggatcccggtgactcgacttggaaccaatgagaaagagcggttgatc
gggttatcggatcggttgcatcaacgggtcgtgggtcaagaccaggcggtgaacgcggtg
gctgaagcggtgctgaggtcacgagccgggctcggaagggctcagcagcccaccggatcc
ttcctgtttctgggtcccacaggtgttggaaaaacagagcttgcaaaggctcttgcagag
cagttgtttgatgatgagaagctgatgattagaatcgatatgtcggagtatatggagcag
cattcggtgtcacggctgatcggagctccgccagggtatgttggtcatgaagaaggcggg
cagttgaccgaggctgtgaggaggagaccatacagtgttgtgttgtttgatgaagttgaa
aaagctcatcaatcggtgttcaatacgcttcttcagatgttggatgatggaaggttgacc
gatggtcaaggtcgaacggttgacttcacaaacacagtcatcatcatgacttcaaatctt
ggagctgagtatttgctaaaagggttatcagggaaaacaacaatggagaaggctcgggaa
atggtgatgggagaagtgaggaagcatttcaaaccggagctcctaaacagacttgatgag
attgtggtttttgatcctttatctcatgatcagttgaggaaagttgctcggcttcagttg
aaggatgtggctgttagattggcggagaggggtgttgctttgggtgtcacggagggggca
ttggatgtgatactgaatcagagttatgatccggtgtatggagcaaggccgattaggagg
tggctggagaggagggtggtgactgagttgtctaagatgctgataagagaagagatcgat
gagaattcgactgttttcatagatgcagagatgaatggggaggaattgagttatagaaca
gaaaggaatggtggagtggtgaatgctgcaacaggggagaaatccgatgtgttgattcat
gttgtgaacacaaatgcaaatggcggggctcgtagtgatgctgcacaggctgtgaagagg
atgaagatcgaggaggtcgatgatgatgatgaaatggatgatgagtaa

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