Lactuca sativa (garden lettuce): 111902263
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Entry
111902263 CDS
T05352
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111902263
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP100
111902263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_14
nSTAND3
AAA_7
AAA_18
IstB_IS21
bpMoxR
RuvB_N
AAA_28
ATPase_2
RNA_helicase
NBD_SMAX1
TsaE
TniB
NACHT
Mg_chelatase
AAA_24
DNA_pol3_delta2
AAA_33
AAA_25
DUF815
Zeta_toxin
Roc
T2SSE
ResIII
ABC_tran
AAA_19
DUF2987
DUF87
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
111902263
NCBI-ProteinID:
XP_023753883
LinkDB
All DBs
Position
4:complement(205390171..205393787)
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AA seq
915 aa
AA seq
DB search
MNPDKFTHKTNEALASGHELAMNAGHAQFTPLHIAAALISDHNGIFRQAINNAGGEEAGN
SADRVFNQALKKLPSQSPPPDEVPASTSLIKTIRRAQSSQKSRGDTHLAVDQLILGILED
SQISELLKEAGVGASRVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILRGDVPSNLADVRVIA
LDMGALIAGAKYRGEFEERLKAVLKEVEDAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVLVAEPSVPDTISILRGLKERYEG
HHGVRILDRALVVAAQLSSRYITARFLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLMMKYKKEKERIDEIRRLKQKR
EELLVALQEAERRYDLARAADLKFGAVQEVETAIAKLEGTTDENVMLTETVGPDQIAEVV
SRWTGIPVTRLGTNEKERLIGLSDRLHQRVVGQDQAVNAVAEAVLRSRAGLGRAQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDEKLMIRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHQSVFNTLLQMLDDGRLTDGQGRTVDFTNTVIIMTSNL
GAEYLLKGLSGKTTMEKAREMVMGEVRKHFKPELLNRLDEIVVFDPLSHDQLRKVARLQL
KDVAVRLAERGVALGVTEGALDVILNQSYDPVYGARPIRRWLERRVVTELSKMLIREEID
ENSTVFIDAEMNGEELSYRTERNGGVVNAATGEKSDVLIHVVNTNANGGARSDAAQAVKR
MKIEEVDDDDEMDDE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgacaaattcacccacaagacaaatgaagctttggcttcaggtcatgaactc
gcaatgaatgctggacatgctcagttcacaccgctacacatcgcagcagctttaatttct
gaccataatggaatattccggcaagcaataaacaatgccggtggtgaagaagcgggtaat
tcagcggatagggttttcaatcaagcgttgaagaaactcccttcccaatcccctccccct
gatgaagttccagcaagtacttctctaatcaagacaattcgtcgcgcccaatcttcacaa
aaatcccgtggtgacacccatttggctgttgatcaattgattttgggcattcttgaagat
tcccaaatttcagaacttttaaaagaagctggagttggtgcatcgagggtgaaaagcgag
gtagaaaagcttcggggtaaagaagggaagaaggtggaaagcgcttcaggggatactaat
ttccaagctctcaagacatatggtcgtgatcttgtagagcaagccgggaagcttgatcct
gtaattgggagagatgaggaaattaggagagtgattaggattttatcaagaaggactaag
aacaatcctgttcttattggtgaacctggtgtgggaaaaactgctgttgttgaaggatta
gctcaaaggattcttagaggagatgtcccaagtaatcttgctgatgtgagagttatcgca
ttggatatgggagctttaattgctggagccaagtatagaggggagtttgaggagagactg
aaagcagttttgaaagaagtggaagacgctgaagggaaggtgatattattcattgatgaa
atccaccttgttcttggagcgggtcgcacagaaggatccatggatgctgcaaatctgttc
aagcccatgcttgctaggggtcaactccggtgcattggtgcaactactttggaagagtat
aggaaatatgtggaaaaagatgctgcttttgagagacgtttccagcaggttttggtggct
gaaccaagtgttcctgacaccataagcattcttagagggttgaaagagagatatgaaggt
catcatggtgttaggattcttgatcgtgctcttgttgttgctgctcaactttcaagccga
tacataactgcacgttttctgcctgataaggctattgaccttgtggatgaggcctgtgca
aatgttagggttcaacttgatagtcaaccagaagaaatagacaatcttgagaggaaaagg
atgcaattagaagttgagcttcatgctttggagaaagaaaaagacaaagcaagcaaagcg
cgtcttgttgaagtgaaaaaggagcttgatgacttgagagataagcttcaaccactgatg
atgaaatacaagaaggaaaaagaaagaattgatgaaatccgcagactgaaacagaaaagg
gaggagcttttggtggcactacaagaagcagaaagaagatacgatttagcaagagctgca
gatttgaaattcggagcagttcaagaagtggaaacagcaatagcaaaactcgaaggaaca
acagatgaaaatgtgatgttgacagaaacagtgggacccgatcagatagctgaggtggtg
agtcgatggaccgggatcccggtgactcgacttggaaccaatgagaaagagcggttgatc
gggttatcggatcggttgcatcaacgggtcgtgggtcaagaccaggcggtgaacgcggtg
gctgaagcggtgctgaggtcacgagccgggctcggaagggctcagcagcccaccggatcc
ttcctgtttctgggtcccacaggtgttggaaaaacagagcttgcaaaggctcttgcagag
cagttgtttgatgatgagaagctgatgattagaatcgatatgtcggagtatatggagcag
cattcggtgtcacggctgatcggagctccgccagggtatgttggtcatgaagaaggcggg
cagttgaccgaggctgtgaggaggagaccatacagtgttgtgttgtttgatgaagttgaa
aaagctcatcaatcggtgttcaatacgcttcttcagatgttggatgatggaaggttgacc
gatggtcaaggtcgaacggttgacttcacaaacacagtcatcatcatgacttcaaatctt
ggagctgagtatttgctaaaagggttatcagggaaaacaacaatggagaaggctcgggaa
atggtgatgggagaagtgaggaagcatttcaaaccggagctcctaaacagacttgatgag
attgtggtttttgatcctttatctcatgatcagttgaggaaagttgctcggcttcagttg
aaggatgtggctgttagattggcggagaggggtgttgctttgggtgtcacggagggggca
ttggatgtgatactgaatcagagttatgatccggtgtatggagcaaggccgattaggagg
tggctggagaggagggtggtgactgagttgtctaagatgctgataagagaagagatcgat
gagaattcgactgttttcatagatgcagagatgaatggggaggaattgagttatagaaca
gaaaggaatggtggagtggtgaatgctgcaacaggggagaaatccgatgtgttgattcat
gttgtgaacacaaatgcaaatggcggggctcgtagtgatgctgcacaggctgtgaagagg
atgaagatcgaggaggtcgatgatgatgatgaaatggatgatgagtaa
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