Lactuca sativa (garden lettuce): 111902569
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Entry
111902569 CDS
T05352
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111902569
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111902569
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111902569
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111902569
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
SR proteins
111902569
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111902569
NCBI-ProteinID:
XP_023754161
LinkDB
All DBs
Position
2:164472836..164475514
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AA seq
257 aa
AA seq
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MADSPRRRYSRSPPYEAPSRSRSRSRSRSRSRSWSRPRGRPASRSRSRSRGREEVVNPGN
TLYVTGLSTRVTQEQLEEHFSKEGKVANCFLVVEPRSRISRGFAFITMDTLEDANRCIKH
LNQSVLEHRQITVERSRRKRPRTPTPGHYLGLKNTRDTGYRGDRGGGGGGGGRYRGGSGR
DDYGYRRSPRRSPPPYRGGRDYSPRRSPPPYRGGGGGGRDYSPRRSPYYGGRSRRERTRS
PPYSPPYRSPERHYARR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctcctcgacgaaggtattcacgatctcccccctatgaagcaccatccagg
tcaagatccaggtcaaggtctcgatctaggtcaagatcctggtcaaggccaagaggtagg
ccagcatcaaggtcaagatccagaagtcgtggaagggaagaggttgtaaatcccggaaat
accctttatgtaaccggcctctccacacgtgtcacacaagaacagctagaagaacacttt
tcaaaagaaggaaaggtggccaactgttttcttgttgtggagcctcgttcacgtatatca
cgtgggtttgcttttataacaatggatactcttgaagatgcaaatcgctgcataaagcat
cttaaccagtctgttcttgaacatcgccagataactgtagagaggtcgagaaggaaacgt
ccaagaacacccacacctggacattacttgggcctgaaaaacactagggacactggctat
cgtggtgacagaggaggtggaggaggtggaggagggaggtatcgtggtggctctgggcgg
gatgactatggataccggaggtccccaaggcggtcaccaccaccgtatagaggtggccgt
gattactctccaaggaggtcaccgccaccatacagaggtggtggtggtggtgggcgggat
tactctcctaggcggtcaccttactatggtgggagatcaaggagggagcgaacacggtct
cctccttattccccaccttacaggagtcccgaaaggcactatgctcgtcgctag
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