Lactuca sativa (garden lettuce): 111902841
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Entry
111902841 CDS
T05352
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Module
lsv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111902841
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111902841
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF1155
End_N_terminal
DUF4135
Motif
Other DBs
NCBI-GeneID:
111902841
NCBI-ProteinID:
XP_023754424
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Position
7:complement(174281699..174283979)
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AA seq
390 aa
AA seq
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MAKENFIPRAVFCFFLMVLIENNHAAVVDVKTKGAKGDGKTDDGPAIMNAWKVACGGPPP
SSLLIPPGTYFASPIQLKGPCKGPIEIKATGATIKAPPEVAKFKTDGWIEIEGVDKLTMT
GGNYDGQGQATWKSNNCASTGVCKLPANIRLTNCKNAVVKDLTSTNSKFFHMNILGCDNS
KLDHVTINAPGTSLNTDGIHIGRLNGLNITNTNIKTGDDCISFGDGSKNVHIDTVTCGPG
HGISIGSLGRYPNEAPVQGIWIKNCTITGTDNGLRIKSWPAGTPGSATDMHFEDIIMQKV
GTPILVDQEYCPSGKCQKGPSKTKLSNVSFRKIKGSSTTKVAVKLICSPGTCQNFEVADI
NLQGPGGPATSECKNIKPKVVGQVVPPACP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaaacttcattccaagagcagtattttgtttttttctcatggtattgatc
gaaaataaccatgctgcagtcgtcgatgtaaaaacaaagggcgccaagggtgatggtaaa
accgatgatggcccggctataatgaatgcttggaaagttgcctgcggaggaccaccacca
agctcgcttctgattccaccggggacttatttcgcatctcctattcaactgaaaggtcca
tgcaagggcccgattgagatcaaggccaccggagcaaccatcaaagccccaccggaggtt
gcaaagttcaaaactgatggttggatcgagatagagggtgtcgataagttgactatgact
ggtggtaattacgatggtcaaggccaggcaacttggaagagtaacaactgcgcctctacc
ggagtatgcaaattaccagctaatatcagattgactaactgcaagaacgcagtggtgaaa
gacttaacatccaccaatagcaaattcttccacatgaatatattgggttgtgacaatagc
aaacttgaccacgttaccattaatgcacctggaacaagtctcaacacggatggaattcac
atcgggagattaaatgggctcaacatcacaaacacaaacataaaaacaggtgatgattgc
atttcgtttggagatggaagcaagaacgtccatatcgacacagtgacatgcggaccagga
catggcattagtattggaagcctcggtagatacccaaatgaagcacctgtacaaggaatc
tggatcaaaaactgcaccatcaccggcactgacaatggactcaggatcaaatcctggcca
gctggcacaccaggtagcgccactgacatgcattttgaagatatcatcatgcagaaagtg
ggaaccccgatattggttgatcaagaatactgcccttctgggaaatgccagaaaggacct
tcaaagacgaagttgtcaaatgtgagctttaggaagatcaagggatcatcaacaactaag
gtagcagtgaagcttatttgcagccccgggacatgccagaattttgaggttgctgatatc
aatttacaaggacctggaggacctgccacctctgagtgtaaaaacatcaaacctaaagtt
gtgggtcaagttgtccctccggcttgtccttaa
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