Lactuca sativa (garden lettuce): 111902842
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Entry
111902842 CDS
T05352
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Module
lsv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111902842
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111902842
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
111902842
NCBI-ProteinID:
XP_023754425
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Position
7:complement(174875068..174882207)
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AA seq
402 aa
AA seq
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MNTENSIRQAICCLFLIAYIARSHAAVVNIKTKGAKGDGITDDGQAIVSAWNEACGKEAP
SSVLIPRGTYMVFPPIDLIGPCKAPIKIKATGAVVKAPPELEKFTTTYWIAIRNVSKLTM
IGGTYDGQGEQTWKQNLCPDGGPGPCPLPVNLQFTNVTNSLLQHITSTDSKFFHMRLSLC
DNTRLDHITILSPANSVNTDGIQIGRLSGVNITNSVMRTNDDCISIGQGCRNIRIKNIMC
GPGDGIGIGSLGRRANEEPVQGIWIKNVTMTDTEHGFRIKTWPTSFPGSVSDLHYEDIIM
NNVSFPIFFDQQFCPLNNCQNGTASNVNISNVSFRNIRGTSATKVALKFDCSADVPCKNI
KVADINLTYEGPEGGPATSECANIKPKVVGKVVPPACPGGPD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaaaactcgatccgacaagcaatatgttgcttgtttcttatagcatacatt
gcaagaagccatgctgctgttgtcaacataaaaaccaaaggtgctaagggcgatggcata
accgacgatggccaggcgatagtaagtgcttggaacgaagcctgtggaaaagaagcacca
agctcggtgttgattccacgagggacctatatggtatttcctccgattgatctcattggc
ccatgcaaggctccaattaagatcaaagccaccggagccgtcgtcaaggccccacctgag
cttgaaaagttcacaaccacgtactggatcgccataaggaatgtcagtaagttgactatg
atcggtggtacttacgacggtcaaggcgaacaaacatggaagcaaaatttatgcccggac
ggcgggcccggaccttgcccacttccagtcaatcttcaattcactaatgtcacaaattca
ttgttgcaacacataacatctaccgatagcaaattctttcacatgaggttatctttatgt
gacaatacaagacttgatcatatcactattttatcaccggcaaacagtgtcaacacagat
ggaattcaaatcgggcgtttaagtggtgtcaacatcacaaactcagtaatgagaacgaat
gacgattgcatttctataggtcaaggatgcaggaacatccgtattaagaatattatgtgt
ggacctggagatggcataggtattgggagtttgggaagacgcgcaaatgaagaacctgta
caaggaatctggatcaagaatgtcaccatgacagatacagaacacggattcaggataaag
acttggcctacttctttccctggaagcgttagtgacttgcattatgaagatatcatcatg
aacaatgtgtcatttcccatattcttcgatcaacaattttgccctttgaataactgccag
aatggaactgcatcaaacgtgaacatatcgaatgtgagctttaggaatatcaggggaacg
tcagcaactaaggtggcattgaagtttgattgcagcgcagatgtaccatgcaagaacata
aaggtggctgatattaatttgacatacgaaggacctgaaggaggacctgccacctcggag
tgtgctaacattaaacccaaagtcgtcggtaaagttgtccctccagcttgtccaggtggg
ccagattaa
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