Lactuca sativa (garden lettuce): 111902869
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Entry
111902869 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111902869
KO
K14799
pre-rRNA-processing protein TSR1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111902869
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111902869
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
111902869
NCBI-ProteinID:
XP_023754448
LinkDB
All DBs
Position
2:13347366..13354403
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AA seq
797 aa
AA seq
DB search
MAGGSRAQVNKSHKTRFASKSSRNVHKTSVKDKSKINKPDRNAMKGARAARLQRNKMMRE
QKRAALLKEKRTTSATTSAPRVIVLFGLSASTNVSSLAGDLSALLSNENNTTQFPAVASS
EYRLRATVVEAPHGDLMACMEMAKVADLIVFVASGNCSSEKDSSNYYMDEFGSQCLSVFR
VLGLPSSAVFIRNLPSDLKKRNDIKKTCISSLSSEFPEDCKFYPADTKDDLHKFMMLFKE
QRLVIPHWRTQRPYIMAQKVDMVADEFGKSTLLITGYVRARNLSVNQLVHVSGAGDFQLG
KIEVLKDPCSLNLKKEGDFMDADEINDSQVIKTLVPDPMKQEPLLVENIPDPLEGEQTWP
TEAEMADADRVQKEKKQKKRSLPRGTSEYQAAWIVDDSDVSGTDSDDDSENGNGMVVDEG
GEYDIPGQGGSRKFDLDDDQASLKLRDSDDETEADSMMMDNDNLTKEQIEEDIRKIKEAH
AEDEEFPDEVDAPVDIPARKRFAKYRGLKSFRTSTWDPKESLPQEYAKIFAFDNFNRTQK
HVLKKAMDMEQGSVDECVVANSYVTLHITQVPIHIASKLCILGKTMPVVACGLLQHESKI
SVLHFRLKKHETYSEPIKAKEELIFHVGFRQFVTRPTFATDSFNSEKHKMERFLHAGRFS
IASVYAPITFPPLPLIVMKSRGDFSTPVLAAVGSLKSIDPDKIILKKIILTGYPQRVSKS
KAAVRYMFHNPEDVKWFKPVEVWTKLGRRGRIKEPVGTHGAMKCILNGVLQQNDTVCMSL
FKRTYPKWPQHWFPMSA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggttctcgagctcaagtcaataagtcgcataagactcgttttgcttcgaaa
tcctctcgcaatgttcacaaaacatccgtcaaagataaaagcaagatcaacaagcctgat
cgcaatgccatgaagggagctcgggctgctcgattacaacgtaacaaaatgatgagagag
cagaagagagctgcccttttgaaagagaaaagaactacaagtgcaacaactagtgctcct
cgtgttattgttttatttggtctatctgcttctacaaatgtaagctcactagcaggagat
ctttctgcattattgtcaaatgagaataatacaactcaatttccagcagttgcatcatcc
gagtacaggctaagagcaacggttgtagaagcacctcatggtgatcttatggcatgcatg
gaaatggccaaggttgcagatttgattgtttttgtggcttctggtaactgttcaagtgaa
aaagatagttccaattattacatggatgaattcggctctcaatgtctatctgtttttaga
gttcttggtttaccaagttctgctgttttcattagaaatttaccttctgatttaaaaaaa
agaaatgatattaagaagacatgcatttctagcctttcttctgaattccctgaagattgc
aagttttaccctgcagacacaaaagatgacttacacaagttcatgatgctttttaaggag
caaaggcttgtgatacctcattggcgtacccaacgaccttacatcatggctcagaaggtt
gacatggtggctgatgagtttggaaaaagtacacttcttattactggttatgttcgtgct
cgtaatctctcagtgaatcagctggttcatgtatcgggtgctggtgattttcaattgggc
aagattgaagttctcaaggatccatgttcattgaatttgaaaaaagaaggtgattttatg
gatgcggatgagataaatgactcacaggtcatcaaaactttagtcccagatcctatgaag
caagagcctttacttgttgaaaatatacctgatcctcttgaaggcgaacagacatggcca
acagaggcagagatggctgatgctgatagagtacagaaggaaaagaagcagaaaaagagg
tctcttcctcggggtacttctgaataccaggcagcttggattgtggatgattctgatgta
tctggtacagatagtgatgatgattcagagaatggtaatggcatggtagttgatgaagga
ggagagtatgacatccctggtcaaggtggtagtaggaagtttgaccttgatgatgaccaa
gcttcactcaagcttagggattctgatgatgaaaccgaagctgattccatgatgatggat
aatgacaacttgacaaaggagcagatagaagaagatattcgaaaaataaaagaagcacat
gctgaagatgaagagttcccagatgaagttgatgctcctgtagatattcctgcaaggaaa
cgatttgctaaatacagaggcctaaagtcatttaggacttccacatgggaccctaaagaa
tctttacctcaagaatatgcaaaaatctttgcatttgataatttcaatagaacacagaag
catgttcttaaaaaagctatggatatggaacaaggaagtgtagatgaatgtgtagttgca
aattcttatgtgacacttcacatcacacaagtccccatccacattgcttcaaaactttgc
attttgggaaagactatgccagttgtcgcatgtgggctcttgcaacacgaatcaaagatt
tctgtccttcacttcaggttaaagaaacacgagacatacagtgagcccataaaagccaaa
gaagaactaatatttcatgttggattcagacagtttgtcacaaggccgacttttgcaact
gatagtttcaattcagagaaacacaagatggaaagatttcttcatgcaggacgcttttct
attgcttcagtatatgctccaatcacttttcctcctcttccattaattgttatgaagagt
agaggtgatttttccacacctgtccttgctgctgttggctcattaaaaagtattgatcct
gataaaatcattctcaaaaagatcattttgaccggatatcctcaacgtgtttcaaagtca
aaagctgcagtacgatatatgttccataaccctgaggatgtcaaatggttcaagcccgtg
gaagtttggacaaaattgggtcgccgtggacgcatcaaagagcccgttggtacacatggt
gcgatgaaatgcatattaaatggtgtgctacaacaaaatgacacggtgtgcatgagttta
ttcaagcgaacataccccaaatggccccagcattggttcccaatgtcggcttga
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