Lactuca sativa (garden lettuce): 111903034
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Entry
111903034 CDS
T05352
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111903034
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Gene cluster
GFIT
Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
111903034
NCBI-ProteinID:
XP_023754598
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Position
9:complement(61384937..61387908)
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AA seq
692 aa
AA seq
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MRSRRKPPCAAHLIILILCSLLLSTRVTARPFVLVLSQDDLKDGPVDESPDDPSSVADWD
EFGESDARSDDDLDPGSWRPIFEPDESNSNSAEEFPINPQLEEYYSSVRKMVAAVSDGGR
AMEDVASEIESAAATGNPHAQSLLGFLYNTGMARERSGAKAFMYHHFAADSGNMQSKLAL
AYTYSRQDVHDKAVILYAELAEAAVNSFLISKDSPVIEPVRIHSGAEENKEALRKSRGEE
DEDFQILEYQAQKGNAVAMYKIGIFYYFGLRGVRRDHAKALWWFSKAVDKGEPRSMELLG
EIYARGAGVKRNYTKALEWLTLASKQKLYSAYNGMGYLYVKGYGVEQKNYTKAKEYFEKA
AENEEAGGHYNLGVMYLKGIGVKKDVKLACKYFIVAANAGQPKAFYQLAKMFHTGIGLKK
NLPMATSLYKLVAERGPWSSLSRWALEAYLKGEIGKAFLLYSRMAELGYEVAQSNAAWIL
DKFGEASMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTERDYDR
AADAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVMLALA
SLWVRRNYANSFMVDLIDSLPGVYPKADEWIKNVVMEEGNATILALFVCLLTVLYLRERQ
RRQAAPGGGGGGGGGVAPPPLRPNDNGAPLVN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcgtcggaagccaccgtgcgccgctcacctgatcatattgatactctgctct
ctcctcctctcgacaagagtaactgcccggccgttcgttcttgtcctctctcaagacgac
ctgaaggatggacccgttgatgagtctcctgatgatccctcttccgtcgccgattgggac
gaattcggtgaatcagacgctaggtccgatgacgacctggatcctggatcctggcgaccg
atattcgagccagacgaatccaactctaattccgccgaagagttcccgatcaatccccaa
ctagaggagtattattcgagcgtcaggaaaatggtcgccgccgtgagcgatgggggtagg
gcaatggaggatgtcgcttcggagattgaatcggccgccgccaccggcaatcctcacgcg
cagtcgctgttagggtttttgtataatacaggaatggctagggagcgtagtggtgccaaa
gctttcatgtaccatcactttgccgctgattctggcaatatgcaatcgaaattggcactc
gcttatacgtattctcgccaagatgtacatgataaagcagtcatactgtatgctgagcta
gccgaagccgctgttaacagtttcttgatctcaaaagactccccagtgattgaaccggtt
agaatccatagcggagcagaagagaacaaagaagctctcagaaaatccagaggggaagaa
gatgaagacttccagatcttggaataccaggcacagaaaggaaatgctgtagccatgtat
aagatcggcatattttactactttggattaagaggagtcaggcgtgatcatgccaaagca
ttatggtggttctctaaggctgtggacaaaggtgaacctaggtccatggagcttcttggt
gagatctatgcaagaggtgctggagttaaacgaaactacacaaaagctcttgaatggctc
acgttagcatcaaaacagaaactttattcagcttacaatggaatgggatacttatacgtc
aagggttatggagtagaacaaaagaactacactaaagcaaaagaatactttgaaaaggct
gctgaaaatgaggaagctggtgggcattacaacttgggtgtaatgtatctcaaaggaatt
ggagtcaagaaagacgtgaagctagcttgcaagtatttcatagtagcagcaaatgctggt
caaccaaaagcattttaccaattggcaaagatgttccacactggtataggtctaaaaaag
aatctcccaatggcaacatcattgtacaaactagttgcagaaaggggaccatggagttca
ttatctagatgggcattagaagcatacctaaagggcgaaatcggaaaagcatttttacta
tactcaagaatggcagaattagggtatgaggtggcacaaagtaacgcagcctggattctt
gataaatttggtgaagcaagcatgtgcatgggtgaatcagggttttgcacagatgctgaa
aggcatcaacgtgcacattctttatggtggcaagcttctgaacagggtaatgaacacgca
gctttgcttattggagatgcatattattatggcagggggactgaaagagattatgatcgt
gctgcggatgcttatatgcatgccaaatcacaatcgaatgctcaagctatgtttaatttg
ggatatatgcatgaacatggtcaaggacttcctttagatcttcatcttgctaaacgttac
tatgatcaagccctagaaattgatcctgctgcaaagttgcctgtcatgttagcccttgct
agcttgtgggtacgcagaaattacgccaatagttttatggttgatttgatagattctttg
cctggtgtttacccaaaagcggatgaatggatcaagaacgttgtaatggaggaagggaat
gcaacgattctggctctttttgtttgcttgttgacggtgctttaccttcgtgagcggcaa
cggcggcaggcggcgcctggtgggggtgggggtgggggtgggggagtggctcctcctccg
cttcgccctaatgacaacggtgcaccgcttgtcaattga
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