Lactuca sativa (garden lettuce): 111903108
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Entry
111903108 CDS
T05352
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111903108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111903108
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111903108
04121 Ubiquitin system [BR:
lsv04121
]
111903108
Enzymes [BR:
lsv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
111903108
Spliceosome [BR:
lsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111903108
Complex C
U4/U6.U5 tri-SnRNP related factors
111903108
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
111903108
Chaperones and folding catalysts [BR:
lsv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
111903108
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
U-box type E3
111903108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
DUF6033
Motif
Other DBs
NCBI-GeneID:
111903108
NCBI-ProteinID:
XP_052625356
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All DBs
Position
3:complement(133778126..133783019)
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AA seq
596 aa
AA seq
DB search
MGKKQHSKDRMYLTKTEWATEWGGAKSKELRTPFKRLPFYCCALTFTPFEDAVCTEDGSV
FDIMHIVPYIRKYGKHPVSGIPLKQEDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAIK
TTGNVFSYEAIKELNLKTKNWKELLTDEPFTRQDIITIQNPNTLDNKALVDFDHVKKSLK
LDDEEIKKMESDPSYNINVRGDIKQMLKELKTEKGRELALHGGGGDKAQNERAAALTAIL
AARERIKNNEVKKSQPGFSVVDAASASVHGRSAAAAKDSSSDKTAARIAMHMSGDRTPVN
AKMVKSRYTSGATSRSFTSTSYDPITKNEFEYIKVEKNPTKKGYVQLHTTHGDLNIELHC
DIAPRACENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGSGKGGESIWGKAFNDEVNSK
LLHSGRGVVSMANSGAHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLSVMEKVPVDD
DDRPLEDIKIISVSVFVNPYSEPDEEEEEEKKKEEEKTVDDEENEKIGSWYSNPGTGVEV
EGAGGGVGKYLKAKTATDTATAATTGGDGGGGRSNGVGKKRKLGVSRQDFKDFSGW
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacaacacagcaaagaccggatgtaccttacgaagacggagtgggccacc
gagtggggcggtgctaagtccaaagagctccgcacaccttttaaacgtcttcccttctat
tgctgcgccctcacatttactccattcgaggacgcagtgtgcactgaggatggcagcgtt
ttcgatatcatgcacatagtcccctacataaggaaatatggaaagcatcctgtttctgga
attcctctcaaacaagaagatctcatcccactaacatttcataaaaactctgaaggagag
tatcattgccctgtattaaacaaggttttcacagagttcacacacattgttgccataaag
acaaccggaaatgtcttctcctacgaggcaatcaaagaattaaacctcaaaaccaaaaac
tggaaagagcttctaaccgatgaacccttcacaaggcaagacatcatcacaattcagaat
ccaaacacactcgacaacaaagctctggtggatttcgaccatgtcaaaaaaagcctaaaa
cttgacgatgaagaaatcaagaaaatggaatcagatccaagctacaacataaatgtaaga
ggtgacataaagcaaatgctaaaggagttaaaaacagaaaagggtcgtgaacttgcacta
catggtggtggtggagacaaggcacagaacgaaagagccgccgccctcaccgccatttta
gccgccagagaacgcattaaaaataacgaagtcaaaaaaagtcaaccaggtttcagtgtt
gttgatgctgcatctgcttctgttcatggaagaagtgctgctgctgctaaagattcttca
agtgacaaaacagctgctagaattgctatgcatatgtctggtgatagaacacctgttaat
gccaaaatggtaaaaagccgttacacaagtggggccacatcaagatccttcacttccaca
tcatacgacccaatcacaaagaacgaattcgaatacataaaagttgaaaaaaatccaacc
aaaaaaggttacgttcaactacacacaacacatggtgatttaaacatcgaattacactgt
gacatagctccaagagcatgcgaaaacttcatcactctttgtgaacgaggctattacaat
ggcgttgcctttcacagaaacataaggaattttatgatacaaggaggggatccgactggg
agtgggaaaggaggggagtcgatatggggaaaggcgtttaatgatgaagtgaattcgaaa
ttgcttcattctgggagaggggttgtgagtatggcgaatagtggggcccacacgaatggg
tcccagttttttatactttataaatcggctaatcatttgaattttaaacatacggttttt
ggtggagttgttggtgggttaactactttgtccgttatggagaaggttcccgttgatgat
gacgatcgacctctggaagatatcaagataattagcgtatcagtgtttgtgaatccttac
tcagaaccagatgaagaagaagaagaggaaaaaaagaaggaagaggagaaaactgttgat
gatgaagaaaatgaaaagattggatcgtggtatagtaatcctggaacaggagtagaggtg
gaaggcgctggtggcggtgttggtaaatatctgaaagccaagaccgccactgacaccgcc
accgccgccaccaccggcggtgatggtggtggtggacggtcgaatggtgtgggaaagaag
aggaaattgggtgtgtcaaggcaagattttaaagatttttctggttggtaa
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