Lactuca sativa (garden lettuce): 111903175
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Entry
111903175 CDS
T05352
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03020
RNA polymerase
lsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111903175
09124 Replication and repair
03420 Nucleotide excision repair
111903175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111903175
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111903175
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111903175
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111903175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
111903175
NCBI-ProteinID:
XP_023754732
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All DBs
Position
9:complement(202917136..202918639)
Genome browser
AA seq
320 aa
AA seq
DB search
MEGASYQRFPKVKIRELKDDYAKFELRETDASVANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCINDQTLDV
TSKDLYSSDHTVVPVDFSDTSSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK
WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYT
YDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS
EDTVEADDQFGELGAHMRGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagcttcataccagagattccccaaggtgaaaatccgtgaactgaaagatgac
tacgccaaatttgagctccgggaaaccgacgccagcgtggccaatgcactccgccgtgtc
atgattgccgaggttccgaccatcgccatcgatcttgttgaaatcgaagtcaactcttct
gttctcaatgacgagttcatcgcacatcgtcttggccttatcccgctaacaagcgagcgt
gccatgagcatgcgcttctcccgcgactgcgatgcctgtgacggtgatggccaatgcgag
ttctgttctgttgagtttcatctgagagctaagtgtataaatgatcaaaccctagatgtt
acgagtaaagatctttacagctctgaccataccgttgtgcctgttgatttctccgatacc
agctctggcttcgaaaatcctgaagatcagagggggatcacaattgtaaaacttagaaaa
gggcaagaactgaggctaagggcaatagctagaaagggaattggaaaagatcatgcaaaa
tggtcacctgctgcaactgtaactttcatgtatgagcctgaaatccacatcaatgaagaa
atgatggaaactttatcacttgaggaaaaaacaagtgttgttgaaagcagccccacaaaa
gtctttggcataaatccccacacacaacaggtggaggtggtggatcctgaagcatacacg
tatgatgatgaggtgttgaagaaagtggaagccatggggaaaccagggcttgttgagatt
tatgcaaaagaagatagttttatatttacagtggagtcaacgggtgcagtcaaagcatct
caattggtgttgaatgccattgaagttctgaagcagaagcttgatgcggttcgtttgtct
gaagatacggttgaagctgatgaccagtttggtgaattgggtgctcatatgcgaggagga
tag
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integrated database retrieval system
