Lactuca sativa (garden lettuce): 111903325
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Entry
111903325 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111903325
KO
K20222
importin-5
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111903325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111903325
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111903325
Pre-60S particles
111903325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
Importin_rep_4
HEAT
HEAT_GCN1
TPR_IMB1
Importin_rep_6
HEAT_2
MMS19_C
TOR1L1_N
HEAT_MROH2B_C
HEAT_EF3_N
Vac14_Fab1_bd
Cnd1
IFRD
Arm
TPR_DNAAF5
VPS15-like_hel
RIX1
DUF577
HEAT_Maestro
ARM_TBCD_2nd
Htt_N-HEAT_1
Adaptin_N
CEP104-like_TOG
HEAT_IPO9_c
TPR_TNPO3_IPO13_3rd
RTP1_C1
Peptidase_C34
G1_gp67_C
HEAT_PBS
Phasin_2
Motif
Other DBs
NCBI-GeneID:
111903325
NCBI-ProteinID:
XP_023754866
LinkDB
All DBs
Position
6:78621687..78627789
Genome browser
AA seq
1113 aa
AA seq
DB search
MDPQVQQAQLAAILGADPAPFETLISHLMSSSNEQRSQAELIFNLCKQTDPNSLFLKLGH
LLQLSPHMEARAMSAILLRKQLTQDDSLVWNRLSPTTQVSLKSILLACVQQEEAKTIMKK
LCDTISELASSILPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSQYIGETLIPHIK
HLHGVFLQCLTTSGSSDVRIAALSAVINFIQCLSSSGDRDRFQDLLPAMMTTLTEALNGG
QEATAQEALELLIELAGTEPRFLRRQLVEVVGSMLQIAEAETLEEGTRHLAIEFVITLAE
ARERAPGMMRKLPQFISRLFCILLQMLLDVEDEPAWHTAENEDEDAGESSNYSVGQECLD
RLAIALGGNTIVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVVSMV
LNSFQDPHPRVRWAAINAIGQLATDLGPDLQVQYHQRVLPALANAMDDFNNPRVQAHAAS
AVLNFSENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYD
AVMPYLKAILVNANDKANRMLRAKAMECISLVGMAVGKEKFRDDAKQVMEVLMSLQGSQM
ETDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLLSAQLKPDVIITSAASDNELDES
DDESMETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLVPLLKF
YFHEEVRKAAVSAMPELLRSAKLAIEKGLAQGRNESYIKQLSDYIVPALVEALHKEPDTE
ICASMLDALNECIQVSGTLLDENQVRSIVDEIKQVITASSSRKTERAERAKAEDFDAEEG
ELLKEENEQEEEVFDQIGEILGTLIKTFKASFLPFFDEMSSYLMPMWGKDKTAEERRIAI
CIFDDVAEQCREAALKYYDTYLPFLLEACNDESPDVRQAAVYGLGVCAEYGGSVIKPLVG
EALSRLNVVIRHPNAVHPENVMAYDNAVSALGKICHFHRDSIDSAQVIPAWLSCLPIKGD
LIEAKVVHELLCSMVERSDAVLLGPNNQYLPKIVSVFAEIICGGKDLATEQTINRIVNLL
RQLQQTLPPATFASTWSSLQPQQQLALQSVLTS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaggttcagcaagcacaactggcggcgatactgggggccgatccggcgccg
ttcgaaaccctaatatctcacctgatgtcttcatcgaacgagcaacgatcgcaagcagaa
cttatattcaatctatgcaaacaaactgatccgaactcgctgtttctcaaactcgggcat
ctgctacaactatctcctcacatggaagctcgtgccatgtcagcaattctgttacggaag
cagttgactcaggatgattcattggtatggaatcggttatctccgacgactcaggtttca
cttaaatctattcttttggcttgtgtgcaacaagaagaagcgaagacgataatgaagaag
ttatgcgatacgatctcggaattggcttcgagtatcctgcctgataacggttggccggaa
ctgttgccgtttatgtttcagtgcgtttcttccgattctcccaagcttcaagaatctgcg
ttcttgatatttgcgcagttgtcacaatacattggggaaactttaattccacacataaag
catcttcatggagtgtttttgcagtgcctgactacgtcggggagttcagacgtgaggatt
gctgctttgagtgctgtaattaattttattcagtgtttgtcgagttccggtgatagagat
cggttccaggatttgcttccagcgatgatgacgacgttgactgaagctttgaatggtgga
caagaggctactgctcaagaggcattggaattgttaattgagttggcagggactgagcct
aggttcttgaggaggcagttagtggaggtggtggggtctatgttgcagatagctgaggca
gagacactagaagagggcacacgacacctagccattgagtttgtgatcacgctagcagag
gccagagagagggcacctggtatgatgaggaagttgccacagtttatcagcaggttgttc
tgcattttgttgcagatgctgttggatgtcgaggatgaacctgcatggcatactgctgaa
aatgaggacgaagatgcaggagagtcaagtaattacagtgttgggcaggagtgcttggat
cggttggctattgctctaggtgggaataccattgtccctgttgcatcagagcagttgccg
gcttacttggctgcccctgagtggcagaaacatcatgctgcactcatcgctcttgcacag
atagctgagggatgctcaaaggtaatgatcaagaatttggaacaagtggtgtccatggtt
ttaaattcattccaagatcctcacccacgtgtgagatgggctgcaattaatgcaatcggg
caattggccacagatttaggcccagacttgcaagttcaataccatcaacgagtgctgcca
gctcttgctaatgccatggatgatttcaataatccaagagttcaggcacatgctgcttca
gcagtgttaaatttcagtgagaactgtactcctgatatcttgacgccttacctagatgga
atagtgagcaaactgcttgtgttgttacagaatggtaaacaaatggtacaagaaggggcc
ttgactgctctagcatcagttgctgattcatcacaggaacacttccaaaagtactatgat
gcagttatgccttacttgaaagctatcttagtgaatgcaaatgataaagctaatcgcatg
cttagagccaaagccatggaatgcattagtttggttggaatggctgttggaaaggaaaaa
ttcagagatgatgctaaacaggtgatggaggtgcttatgtccttacaaggatctcaaatg
gagactgatgatcccaccaccagttacatgcttcaagcgtgggccaggctatgcaagtgc
ttagggcaggatttccttccttacatgagtgttgttatgcctcctttacttctatctgct
caactcaaacctgatgtcatcattacctcagcagcttcagataatgaacttgatgaatca
gatgatgaaagtatggagacaatcacacttggtgataaaagaatagggatcaagacaagt
gttctagaagaaaaagctacagcttgcaacatgttgtgttgttatgcagatgagttgaag
gagggtttctatccatggattgaccaggttgcaccaaccttggtcccacttctcaaattt
tactttcatgaagaagttaggaaagctgctgtttcagccatgcctgaattattgaggtct
gcaaagttagcaatagagaaagggcttgctcaaggtcgtaatgaatcttatataaagcag
ctctctgactacatagttcctgctttggttgaagctttacataaggaacctgatacggaa
atctgtgcaagtatgctggatgctttaaacgagtgtatacaggtatctggaacacttcta
gatgaaaaccaggtgagaagcattgtggatgagataaaacaggtgatcacagccagctca
agcagaaaaacagaaagagcagagagggccaaagctgaagattttgatgctgaggaagga
gaattgcttaaagaggaaaatgagcaagaagaagaagtctttgatcaaattggtgaaatc
ttgggaactttgataaaaacatttaaagcctccttcttgcctttctttgatgagatgtca
tcatatttgatgcctatgtggggcaaggacaaaacagctgaagaaagaaggattgctatt
tgcatctttgatgatgtggctgaacagtgtcgtgaagcagctctaaagtattacgataca
tatcttcctttccttctagaagcttgcaatgacgagagtccagatgtccgccaggcagct
gtatatggacttggagtgtgtgcagagtatggtggatctgttataaagccacttgttgga
gaggctctttcgaggctaaatgttgtaatcagacaccctaatgctgttcatcccgagaat
gtgatggcatatgataatgcggtttctgctttggggaaaatttgccattttcatcgcgat
agtatcgactcagctcaggttattcctgcatggttaagctgtttgccaatcaaaggagat
ctcatcgaagccaaagttgttcacgagctgctatgttcaatggttgaaaggtcagacgcg
gtacttctaggcccaaacaaccagtatctccctaaaattgtttctgtatttgctgagatt
atttgtggagggaaggatcttgcaacagagcaaactataaaccggatagtgaacttgctg
agacagcttcagcagacactgccacctgcgacatttgcgtcgacatggtcaagcttgcag
ccacagcagcaacttgcattacaatcagtcctcacatcatag
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