Lactuca sativa (garden lettuce): 111903331
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Entry
111903331 CDS
T05352
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111903331
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
111903331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
111903331
NCBI-ProteinID:
XP_023754873
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All DBs
Position
6:79135530..79145016
Genome browser
AA seq
1888 aa
AA seq
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MWTNVFKIGGLHQVSWFQYLPNESDPNISDRSAKLNQRDFAAQLVLSSHLQLQKDGFLST
WGNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSPNDKAKAIVSKLRVLASGVWLAPGDS
EEVAAALSQALRNCIERALVNLSYMRFGDVFSRYHPSSQGESFRRGRPMLEFIFTATEEA
VFVHVIISAKHVRALSNGDMEAILKRTSSHSSDRLPVIASPHGMRGRLTGFCPGDLVKQL
YFSSGKFKASNGIVGLPNQMSQTSGCQLRGQKCYLEVTLGCESVKNEKPLPSNSTKNFSK
HHSTENEKGPTYDKTFIYPTEAVLVPVVQTSSARSSLKRFWLQNWMGPSLSGSSFSMQCD
ALSSMDGSWHDASIRCQQGYNSSGNSNSSSISTSSSSDSDYRMTAETGDLEADADSLSCI
KSGLTSADQMHIDASKMGSKRSRPGMTESYGQAGAVINDFGSMEVNNEQGGSQWDWDDDD
RGMGMDIQALLSEFGDFGDFFENDALPFGEPPGTEESQTQTPMFSATDGGDASSSPFTGM
MDASDQIIIPLGFSSFESFNPPSTVVEESISKNQELTKETVSSGSMNYNPPANNTEFDYV
IKAEAMMTFAPEYSAVETPGNDLLLTVIKTPYVPKSRTTESANSSTNNYIYSSIPPKHDL
SDDKSGANLNDKNYYTHVESGKLKDKKDVKDEKLSFRDSFGFGEDVANANASGFSSLSTA
SRSKILEGGLGMENFVLSSKTGVANELECVMFQAFMCRIRHTLLASNRLSGNNNNNNNNN
NNNNNNNNNTILYQMHSESNVLGDNMSSKYDIKKKETIPVRIAGGDMDTGLLDGPLNSPV
GVWRTVGVAKGSKAMSMTQNMESFGNIPHNSFTEEGMLLSYGQRQPLLELLDGMSLLFQQ
ALTFVDVTLDSDCGDGPYGWLAMQEQWRRGFSCGPALVHAGCGGVLAASHSLDIAGVELA
DPLSADVPASYAITLLQSDIKLALKSAFGNFDGPLSVMDWCKGRNGQIDGFSAESSASIN
DCRDSSSTPTSPSQSAGGSTSCLSKGNGNRIDDVSERRSNQDESEQQLGLRPALLVLPIP
AILVGYQDDWLKTSASSLQHWEKAPFEPYAMQKHMNYCVVCPDIDPLTTAAADFFQQLDT
VYETCKLGTHSPQNLGNQTSKDSVKWSTSGFVLLDCPQSMKIEGDSASLVGSISDYFLSL
SNGWDLTSFLKSLSKVLKTLKLNSIFAPNSKEGNTTPCTVIYVVCPFPEPVSILKTVVES
CVAIGSAMCPPSDKERRSALQNQVGKALSCTTAVDEASISNIVTISGFSVPKLVLQIITV
DSIFRVTTPSLNEPVILKEIAFTVYNKARRISRGNGIADSIPSVRSQSQSHSGMMQMNSN
SPIPGMWKDSIAPRMVGPREGEWDNNSWQMSNRVTGEYFLQDELKYMFEPLFILADSPER
GIPPESLKVLSDDGTSSDTGDGLDDGYGSTHKPPPSLHCCYGWTEDWKWLVCIWTDSRGE
LLDSYTFPFGGISSRQDTKGLQFLFVQILQQGCQILQACSPETTTARPRDFVITRIGCFF
ELECQEWQKALYSIGGSEVKKWSLQLRRSVPDGIPASSNGGSEMGMIQDRNLAAHGKGGG
FMKGGGMGQAASRKQILSGGGGGGHMGMDNSKGLLQWVQSITFVSVSVDHSLQLVYQADS
SPGTTQGSGIMGQSVYTEGFTPVKSLGSTSASYIFIPSPTMRFLPPNPLQLPTCLTSESP
PLAHLLHSKGSAIPISTGFVVSKAVPSMRKDSRTNSKEEWPSVLSVALFDYYGGNNNNNS
NNNNNNNNNNNNNNNEKTSKNMGKSMENHVILDRVAAELHALSWMTVSPGYLERRTSLPF
HCDMVLRLRRLLHFADKQLSQISVKSEV
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgtcttcaaaatcggtggtctacatcaagtatcatggttccaatatctc
ccgaacgaatctgatcccaacatttctgatagaagtgcaaagttaaaccaaagagatttt
gctgcacaattagtcctttcatcccatttgcagttacaaaaagatggattccttagcaca
tggggtaattcttttgttggcccttgggatccatctcagggtctacataaccctgatgag
aaaatcaagctatggctttttatccctggtcgccattcgtctcccaatgataaagccaaa
gccattgtatctaaactaagagttctagcatctggagtttggttagcacctggggattct
gaagaggtggcagctgcactttctcaagctttaaggaattgtattgaaagagcattagta
aatctttcatatatgagatttggggatgtattttcaagataccatccatcttcacaagga
gaatcatttaggagaggcagaccaatgcttgagttcatatttactgcaacagaagaagca
gtattcgttcatgtcataatatctgcaaagcatgttcgggcactttcaaatggtgacatg
gaggcaatcttgaagcgcacgtctagtcattctagtgacaggcttccagttattgcctca
cctcatggaatgcgtggcagacttacaggattttgtccaggtgatcttgtgaagcaattg
tatttcagttctggaaagttcaaggcttcaaatggaattgtaggtcttccaaaccaaatg
tcccaaacctctgggtgccaactcaggggccaaaaatgttaccttgaagtaaccctaggg
tgcgaaagtgtcaaaaatgagaaaccattaccatcaaattcaactaaaaacttttcaaag
catcattcaactgaaaatgagaaggggcccacgtacgacaaaactttcatatatccaacc
gaagcagttcttgtacccgttgttcaaacatcatccgctagatcctctctaaaaagattc
tggcttcaaaactggatgggcccatcattgtctggttcctctttctctatgcaatgtgat
gctttgagtagcatggatggatcatggcatgatgcaagcatccgatgtcaacagggttac
aatagtagtgggaatagtaatagtagcagtattagcacaagttcatctagtgatagtgat
tatagaatgacagcagaaactggtgaccttgaagctgatgctgattctctttcttgcata
aaatctggattaacttctgctgatcaaatgcatattgatgcctccaaaatgggtagcaag
cgatcaaggcctggaatgactgagtcatatggtcaagctggagcagtcattaatgacttt
gggtcaatggaagtcaacaatgagcaaggtgggtcccagtgggattgggatgatgatgac
agaggcatgggtatggacattcaagcacttctctcagagtttggagattttggagacttt
tttgaaaatgatgctttaccttttggagaaccaccagggactgaagagtcacaaacacaa
actcccatgttttctgcaacggatggtggagatgcaagtagcagcccatttacagggatg
atggatgcatctgatcagatcattattccacttgggttttcatcttttgaaagttttaat
cctccatcaactgttgtagaagaatccataagcaaaaatcaagaactcacaaaagaaaca
gtgtcatcaggctcaatgaactacaacccaccagctaacaacactgagtttgattatgta
ataaaagcagaagccatgatgacattcgcacctgaatattcagcagttgaaacccctgga
aatgacttgttattaactgtcattaaaaccccatatgtcccaaaatcaagaacaaccgaa
agtgcaaattcaagcacgaataattacatctactcttcaattcctcctaagcatgattta
tctgatgataaatcgggtgcgaatttgaatgataagaactactacactcatgtggaaagt
ggaaaacttaaagataaaaaagatgttaaggatgaaaagctttcgtttcgcgacagtttt
ggttttggagaagatgttgctaatgctaatgcttcaggtttcagttctttaagtactgct
tcaagatcaaagattttggaaggaggattaggaatggagaattttgttttgtcatcaaag
acaggtgtcgcgaatgaactcgaatgcgtcatgtttcaagcttttatgtgtagaataaga
catacattattagcttcaaacagattatccgggaacaacaacaacaacaacaacaacaac
aacaacaataataataataataataatacaattttgtatcaaatgcatagtgaatcaaat
gttttgggggataacatgtcatcaaaatatgatataaaaaagaaagaaacaattccagtt
agaatcgcaggtggtgacatggacactgggcttctagatgggcctttgaactcgcctgtt
ggtgtttggaggacagttggtgtcgcaaaagggtcaaaggcaatgagcatgacacagaat
atggaatctttcgggaatattcctcataattctttcactgaggaaggaatgttgttgtca
tatggtcaaaggcaacctcttttagagcttcttgatggaatgtctttgctttttcaacaa
gcgttgacttttgttgatgtcactttggattccgattgtggggacgggccctacgggtgg
ttggcaatgcaagagcaatggagacgcgggttttcgtgtgggcccgctttggttcatgcg
ggttgtggcggggtgttggcagcttctcattctcttgatattgctggtgtcgagttagcg
gatccactttccgctgatgttccggcatcgtatgctataacattactacaatcggacata
aagttagccttgaaatcggcttttggtaactttgatggacccttgtcagtcatggattgg
tgcaaagggcgaaatggtcaaattgatgggttttcagctgagtcatcagctagtataaac
gattgtagagattcttcaagtacaccaacaagcccatctcaatctgctggtggatcaaca
tcctgtcttagcaaaggtaatggaaatcgaattgatgatgtaagcgaaagaagatcaaac
caagatgagtcagagcagcaactcggcctcaggcctgcacttcttgtgcttcctattcct
gctattcttgttgggtatcaagatgattggctaaagacatcagcaagctctcttcaacat
tgggaaaaagctccttttgaaccttatgctatgcagaaacacatgaattattgcgttgta
tgtccagatatcgatccccttacaactgctgctgcagacttctttcaacagctcgacact
gtttatgaaacctgcaaattgggaactcattcacctcaaaatttgggtaaccaaacttcc
aaagactcggtcaaatggtcaacttctgggtttgttttactagattgccctcaatcaatg
aagatcgaaggcgatagtgcatctctcgtgggatcaatcagtgattactttctttcttta
tccaacggttgggatttaacaagtttcttgaaatccctctccaaagttctcaaaacccta
aaactcaattccatctttgcccctaattcaaaagaaggaaacaccactccatgcacagta
atatacgtggtgtgcccgtttcccgaacccgtttcgattttaaaaaccgtggttgaatca
tgtgtagccattggatctgccatgtgtccaccatccgataaagaacgaagatccgcctta
caaaatcaagttggaaaggctttaagttgcacaacagctgtagatgaagcatcaatttca
aacattgtgacaatttccggtttcagtgtccctaaattagtcctccaaatcataaccgtt
gattccatctttcgtgtcacaaccccgtctctcaacgagcccgtgattttaaaagaaatc
gccttcaccgtctacaataaagcccgaagaatctcccgaggaaatggaatcgcggattcc
attccatcggttagatctcagtcgcagtctcattctggaatgatgcaaatgaattcgaat
tcgccgattcctgggatgtggaaagactcaattgcccctcgaatggtgggacctagagag
ggcgagtgggataacaactcatggcaaatgtctaatcgtgtcacgggagaatattttctt
caagatgagttaaaatacatgtttgagccgctttttattcttgcggattcaccggaacgc
gggattccgccggaatcattgaaggttttgtcagatgatgggacgagttcggataccgga
gacgggttggatgacggatacgggtcgacccataaacctcccccgagtttacattgttgt
tatggatggacagaggattggaagtggcttgtttgtatatggactgattccagaggggaa
ttactcgatagctatacgtttccattcggtggaatcagtagtagacaagacacaaagggg
cttcaattcctttttgttcaaattttgcaacaaggttgtcagatacttcaggcatgttca
ccggaaacaaccaccgccaggccacgagattttgtcattacgcgtatcggttgctttttt
gaactcgaatgccaagaatggcagaaagcactttattctattggtggctcggaggtgaaa
aagtggtcattgcaactccggcgatcggtgccggatgggattccggcgagtagtaatggc
ggttctgaaatgggtatgattcaagatcggaatctggcggctcatgggaagggtggtggg
tttatgaaaggtggtgggatggggcaggcggcttctagaaagcagattttgagtggtggt
ggtggtggtggacatatgggaatggataattccaagggtttgcttcaatgggtgcaaagt
ataacttttgtatcggtttcagttgatcattctttacagttggtttatcaagcggattca
tctccagggacaactcaagggagtggaatcatggggcaatcggtgtacactgaaggattc
acacctgtaaaatctctgggttccacatcagcatcttacatattcattccatcacccacc
atgcgattcctccccccgaaccccctccaactccccacctgcctaacctcggaatcaccg
ccactcgcccacctcctccacagcaagggttccgccattcccatttccaccggatttgta
gtctcaaaagccgttccttccatgcgaaaagattcaagaaccaactccaaagaagaatgg
ccttcggttctctcagtagcccttttcgattactacggaggcaacaacaataacaatagc
aacaacaataataataataataataacaacaacaataataataacgaaaaaacatccaag
aacatgggaaaatctatggagaatcatgtgattttggacagagtggcggctgagctacac
gcgttgtcttggatgactgtgagcccggggtacttagaaagaagaacatcgcttccgttt
cattgtgatatggtgttgaggttaagaaggcttttgcattttgcggataaacaactctcg
cagatttcggttaagtcagaagtttag
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integrated database retrieval system
