KEGG   Lactuca sativa (garden lettuce): 111903462
Entry
111903462         CDS       T05352                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03020  RNA polymerase
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111903462
  09124 Replication and repair
   03420 Nucleotide excision repair
    111903462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111903462
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111903462
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111903462
  RNA polymerase III system
   RNA polymerase III
     111903462
  RNA polymerase I system
   RNA polymerase I
     111903462
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111903462
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG TbpB_A
Other DBs
NCBI-GeneID: 111903462
NCBI-ProteinID: XP_023754996
LinkDB
Position
1:complement(116605084..116607773)
AA seq 145 aa
MVNPHFDDTIKVIGVDADGKKYDKVSRIEARGEETDIHIVLDVNSQLYPMHAGEKYRMVL
SQTLNEDGSTVTTHTQGSKKSLADRFEYVMHGLLYKISDDKNQNGDAEVAVYISFGGLQL
MMKGAPVKMGKFKVDQRLFLLLLKE
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttaaccctcactttgatgatacaattaaggtgattggagtggatgcagatggtaaa
aagtatgacaaagtttcacgtattgaagcacgaggggaggaaactgacatacacattgtg
ttggatgtgaattcgcaattgtaccctatgcatgccggagagaaatatcggatggttttg
tcacaaactttaaatgaagatggctcaactgttaccactcatactcaaggaagcaagaaa
tcacttgctgacagatttgagtatgtgatgcatgggttgttatacaagatctcagacgac
aagaaccaaaatggtgatgctgaagtggctgtgtacatatcatttggagggcttcaactg
atgatgaagggagctcctgtgaagatgggtaaatttaaggtggatcaaaggctgtttctt
cttttgctcaaggagtaa

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