Lactuca sativa (garden lettuce): 111903523
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Entry
111903523 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111903523 isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111903523
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
90S particles
Other 90S particles
111903523
Pre-60S particles
Other pre-60S particles
111903523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WD40_RFWD3
WD40_Gbeta
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_RIG_1st
WDR54
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
111903523
NCBI-ProteinID:
XP_023755067
LinkDB
All DBs
Position
5:157179192..157182757
Genome browser
AA seq
504 aa
AA seq
DB search
MISAISWVPKGASKAVPSAADPPSKEEIEEIKKTVLVEQGYGLGGVDVESEEDDEDMSVD
ASKQPAEIEQALGAANALGKASTRKAGGSDLRDIADGLDELNMDDYDDEDDAIDIFGSGL
GDTFYPSNELDPYIKDKDDDEDSEELEDVIIKADDAVVVCARNEDDMSHLEVWIVEDPEG
DSNMYVHHDILIPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSLI
LGGVAEKKKKKKKGKKTEKSIKYKEDSHTDAVLGLSWNKGYRNILASASADKLVKIWDVA
TGKCKLTMDHHTDKVQAVAWNHHEHEVLLSGSFDHTVVMRDGRVPTHLGFKWSVSADVES
LAWDPHEQHSFVVSLEDGTVVGFDIRTATSNPSAELKPNFTLHAHDKAVCAISYNPIAPN
LLATGSQDKMVKLWDLSNNQPSCIASQNRKAGAIFSLSFSQDCPFLLALGGSKGNLELWD
TLSDVAISRRFGKYAVQNKVPASA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagcaatatcatgggttcctaaaggagcttcgaaagctgtcccttctgcagct
gatcctccttcaaaagaggaaatcgaggagataaagaagacagttctcgtggaacaaggg
tatggtcttgggggtgtggatgttgaaagcgaggaagacgatgaagatatgagtgttgat
gcatccaaacagcctgctgaaatcgagcaggcgttaggtgcagctaatgcacttggtaag
gcttctacaaggaaagctggtggatccgacctccgtgacatagcagatggtctagatgaa
ctaaacatggatgattatgatgatgaagatgatgccattgacatatttggttcggggctt
ggggacacgttctatccaagcaatgaattagacccttatatcaaggataaagatgatgat
gaggactctgaagagcttgaagatgtgattatcaaagccgatgatgctgttgtagtttgt
gcacgaaatgaggatgatatgagtcatctagaggtttggatagtagaggatccagagggt
gactcaaacatgtatgttcaccatgatattcttatccctgcatttcctttatgcacagca
tggcttgattgcccaattaaaggtggagaaaaaggaaatttcatagctgtgggctcaatg
gaacctgcaattgaaatatgggatcttgatattatggatgaagtgcaaccatctctcata
ttaggtggtgttgctgagaaaaagaagaagaaaaagaaaggaaagaagacagagaaatcc
atcaagtacaaagaagacagtcacactgatgctgttcttggtctttcttggaacaaaggg
tataggaatatacttgctagtgcaagtgctgataagttagtgaagatttgggatgtggca
actggaaaatgcaaacttaccatggatcatcatacagataaggttcaagcagttgcatgg
aatcatcatgagcatgaagttcttcttagtggatccttcgatcatacagttgttatgagg
gatggaagggttcctacacatttagggtttaaatggtctgttagtgctgatgttgaaagc
ttggcgtgggacccacatgagcaacactcctttgtggtgagtttggaggatggtacagtg
gttggatttgatatcagaacagcaacatctaatccatcagctgagttgaagccaaatttt
acacttcatgcacacgataaagctgtttgtgctatttcttataaccccattgcaccaaat
cttctcgcaaccggttctcaagacaaaatggtcaaactatgggatctatcaaacaaccaa
ccttcatgtattgcctcacagaatcgcaaagcgggagctatcttttcattatctttctca
caagactgtccctttttgcttgctcttggtggctctaaaggaaatttggagttatgggac
acattatcggatgttgctatttcaagaaggtttgggaaatacgctgtgcaaaataaggtt
ccagcatcagcttga
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