Lactuca sativa (garden lettuce): 111903588
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Entry
111903588 CDS
T05352
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111903588
04121 Ubiquitin system [BR:
lsv04121
]
111903588
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111903588
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
111903588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
111903588
NCBI-ProteinID:
XP_023755123
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All DBs
Position
8:complement(259976914..259981032)
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AA seq
1081 aa
AA seq
DB search
MSSHVRSDRRDNRPRFPRRQEWIPRGSTATVTTTAVDANSSSTVAPIPDANGGEPNIRSG
PPPQNAHNRGNVGVQRRQQQHMPRVNQTRDRRKDAPREERGSKGTTGALPQLVQEIQDKL
LKGTIECMICYDMVRRSAPVWSCSSCFSIFHLHCIKKWARAPTSIDLSAEKNQGFNWRCP
GCQSVQLTSSKDIRYVCFCGKRQEPPSDPYLTPHSCGEPCGRPLEKEVVGSGVSRDDLCP
HRCVLQCHPGPCPPCKAFAPPRPCPCGKKTITTRCSDQKSVLTCGQRCGKPRKCLRHRCE
NTCHVGPCDSCEVPIEASCFCKKNTEVVVCGGMSVKGEVNVQDGIFSCSSTCGKPLGCGN
HLCKETCHPGVCGDCDLLPGKVTSCYCGKSSLQEERKTCLDPIPTCSQTCDKTLPCGLHQ
CKETCHPESCPPCQVMVTQKCRCGSTSRTVECFKTSMEVDTFTCDKPCGRKKNCGRHRCS
EKCCPLSNSHNLHRFEDWDLHMCSKPCEKKLRCGQHDCESLCHSGHCPPCPETIFTDLTC
ACGRSSIPPPLPCGTPPPSCQYPCSVPQPCGHVSSHSCHFGDCPPCSVPIPKECIGGHVV
LRNIPCGSKDIRCNKICGKTRQCGMHACLRTCHPSPCDSSGGSTSTSTSGVKASCGQTCG
APRRDCRHTCTALCHPFNQCPDVRCEFPVTISCSCNRITATVPCDAGGSNSGYNADTVLE
ASTIQKLPAPLQPVESNGKKIPLGQRKLVCDDECSKMERKKVLADAFGVTTPNLDALHFG
ENTAVADMVGDLFRRDPKWVLAVEERCKMVVLGRSRGGSAAALKVHVFCPMLKEKRDAVR
LIAERWKLSISAAGWEPKRFIVVHATPKSKPPARILGAKGVNPTSMVQPLGFDPLVDMDP
RLVVALFDLPSDADVSALVLRFGGECELVWLNDKNALAVFSDPARAATAMRRLDHGSVYY
GAAVVGVVSNGGGNVWGASGGSTAKDHVNPWKKAVVQESSTTGDWGQSSWSVSDEWAGGS
SAVKEVPITSSANRWSVLESEGGGSLAEESGKVVVGEGEGEAAGKQEENLEVVEDWEKAY
D
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacgttcgaagtgatagaagagataacagacctaggtttcctcgtcgtcaa
gaatggattcccagaggatccactgccacggtcacaaccactgcagtggatgctaattcc
tcgtcaacagttgctccaattccagatgcaaatggtggggaacctaatattagatcaggt
ccaccgcctcaaaacgctcataatagaggaaatgttggggtacagagaaggcagcaacag
catatgcctcgggtaaatcagactagagatagaagaaaggatgctcctcgcgaggagaga
ggttcaaaaggcacgacaggagctttacctcaacttgttcaagaaattcaagacaaactt
ctaaaaggtacgatcgaatgcatgatatgttatgatatggtgaggcgttctgcccctgtt
tggtcctgttcaagctgcttttcaatcttccatttacattgtatcaagaagtgggctagg
gcacctacttccatcgacttatctgcagagaaaaatcaaggattcaattggcgatgccct
ggatgtcaatcagttcagctcacgtcctcaaaagatatccgttatgtttgtttctgtgga
aaaagacaggaaccaccttccgatccatatctaacccctcattcttgtggtgaaccttgt
ggaagaccacttgagaaagaagttgttggctctggtgttagtagagatgatctttgtcct
catcgttgtgttctccaatgccaccctggaccatgtccaccttgtaaagcttttgcccca
ccaagaccatgtccatgtgggaagaaaaccatcaccacaagatgctccgatcagaaatct
gttctcacgtgtggccaaagatgtggtaaaccccgtaagtgtctccgccaccgttgtgaa
aacacctgccatgttggtccttgtgattcatgtgaagttccaattgaagcctcttgtttc
tgcaagaaaaacacagaggtggttgtttgtggaggcatgtctgtgaaaggtgaagtaaac
gttcaagatggtatcttttcatgttcttccacttgtgggaagcctctcggatgtggtaat
catctctgtaaagaaacttgtcaccctggtgtttgtggagactgtgatttgttgcctgga
aaggtgacatcatgctactgtgggaaatcaagcttacaggaggaaagaaaaacttgttta
gacccaatccctacatgctcacaaacatgtgacaaaaccctcccttgtggattacatcaa
tgtaaagaaacatgtcatccggagtcatgtccaccatgtcaggtaatggttactcaaaaa
tgtcggtgtgggtcaacttcaagaactgtggaatgtttcaaaaccagcatggaagtggac
actttcacatgtgataaaccttgtgggcgtaaaaagaactgtggtagacaccgttgcagt
gaaaaatgctgcccgctttcaaactcccacaatttgcatcggtttgaggattgggatcta
cacatgtgttcaaagccgtgtgagaagaaactaagatgcgggcagcatgattgtgaatct
ttatgtcatagtggccactgcccgccctgcccggagactatcttcaccgatttaacctgt
gcttgtggaagatcttcaatcccaccaccactcccctgtggtacaccaccaccttcttgt
cagtacccgtgttcggttcctcaaccatgtggtcatgtctcttcccacagctgtcatttt
ggggattgcccaccatgttctgttcctatacctaaagaatgcataggtggacatgtggtt
ttaagaaacatcccatgtggatcaaaagatatcagatgtaacaaaatttgtgggaaaaca
aggcaatgtgggatgcatgcttgtttaaggacatgccacccgtctccatgtgattcctcc
ggtggttccacttccacttccacttccggcgtgaaggcttcatgtggtcagacatgcggt
gctccccggagagactgccgccacacgtgcaccgccctttgccacccgttcaaccagtgt
ccagatgtaagatgcgagttccctgtcacaatctcatgctcttgtaatcggatcaccgcc
actgttccttgtgatgctggcggcagcaatagtggctacaacgccgacactgttctagaa
gcttccacaatccagaaattaccggccccacttcaaccggtggaatcaaacggaaaaaag
attccacttggacaacggaagttggtttgtgatgatgaatgttcgaaaatggaacggaag
aaagttctcgcggatgcttttggtgtcaccactccaaatctagacgcgcttcatttcggt
gagaatactgctgttgctgatatggtaggcgacttgtttagacgcgatccgaaatgggtt
ttggcggtggaggagcggtgcaagatggtggttcttggccggagccgtggcggctcggcg
gcggctctcaaagtccatgtgttttgtccgatgttgaaagagaagagggacgcggtgagg
ctgatagcagagaggtggaagctgtcgataagcgcagccggttgggaaccgaaacgcttc
attgtggttcatgctacacccaagtctaaacccccggctcggattcttggagccaaaggg
gtgaacccaacgagcatggtgcaaccgcttgggtttgacccgttggtggacatggacccg
aggttggttgtggctttgtttgatttgcctagtgatgcggatgtgagtgctttggttttg
agatttggtggtgaatgtgaattggtgtggttgaatgataagaatgcattggcggtgttt
agtgacccggctcgggcggcaaccgccatgcgccgcttggatcatgggtcggtttattac
ggtgcagcggtggttggggtcgtgtcgaatggtggaggtaatgtttggggtgccagtggt
gggtcgacagctaaggaccatgtgaacccatggaagaaagcggtggtgcaggagtcgtcc
accaccggagattgggggcagagttcatggagtgtttccgatgagtgggctggtggcagc
tcggcggtgaaagaggttccgatcacttcgtcggcgaatagatggagtgttttggagtca
gaaggtggcggcagtttggcggaggagtctgggaaagttgtggtgggggagggagagggt
gaagcagcggggaaacaggaggagaacttggaggtggtggaggactgggagaaggcgtat
gactga
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