Lactuca sativa (garden lettuce): 111903613
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Entry
111903613 CDS
T05352
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111903613
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111903613
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111903613
04121 Ubiquitin system [BR:
lsv04121
]
111903613
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111903613
Peptidases and inhibitors [BR:
lsv01002
]
Metallo peptidases
Family M67
111903613
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Others
Others
111903613
Ubiquitin system [BR:
lsv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111903613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
DUF4515
Motif
Other DBs
NCBI-GeneID:
111903613
NCBI-ProteinID:
XP_052621957
LinkDB
All DBs
Position
8:complement(259267708..259276918)
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AA seq
527 aa
AA seq
DB search
MKPSSGAINVAASAQKINVDNRISLRYYYRIAENILRQAAIFREEKNIIDLYIMLLRFTS
LATETIPFHRDYRASVQRDKLYLKKKILSVITELEGLKPAVREKLEELSRKHTYQSNGWS
NLPQTKLLESSKSLPSVRQQTSLNTYAINKYQAPQVQVSNVNGGYGYQDTRMQLYSPVNT
LEEQTRQFSLNIPRAREETLSRHSILGPNGLRGQHPAPTFNVAVRYPSNIDLSPVEIPRE
KKLHLLENGASVEKISSNLEHEKPSVEESTILPTKTINQAHINELDSLICFDEKPETPPI
QMEIIRQPSPPPVLAEVQDLIPTASPPVTDAGPASLKVNSTDGVVVSESPLELHISTKLM
DNFMKMAKSNTDKNLETCGILAGSLKNRKFYVTALIIPKQEATTDSCQATNEEEIFEVQD
KRSLFPLGWIHTHPTQSCFMSSIDVHTHYAYQIMLPEAIAIVMAPRDSSRKHGIFRLTTP
GGMGVIRSCPHRGFHAHDAPSDGSPIYKQCTDVYIDPKLKFDVIDLR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatcttccggagcaatcaatgtagctgccagcgcacagaaaataaatgtcgat
aatcgaatttctctccgttactactaccggatcgccgagaacattcttcgccaggctgcc
atcttccgagaagagaagaatattatcgatctatatattatgctcctaaggtttacaagt
ttggctacagaaacaataccattccatagagattatcgagcatctgttcagagagacaag
ctttatctgaagaagaaaatattgagtgtcataactgagctggaggggttgaagccagct
gtacgagaaaagcttgaagagttatccagaaaacatacatatcaatcaaatgggtggagt
aatcttcctcaaacgaaattgttggagtcatcaaaatctttaccttctgttaggcagcaa
acttcactgaatacttatgccatcaataagtaccaggcaccacaggtacaggttagtaat
gttaatggggggtatggctatcaagatactaggatgcagttgtattcacctgttaatact
ctggaagagcaaactaggcaattttctctaaatattcctcgtgcaagggaagaaactctc
tccagacattctattttgggcccgaatggacttcgtggacaacacccagctcctaccttc
aatgttgcggttcgttatccaagcaatatagatttgtcaccagtggaaatcccaagggag
aagaagcttcatttgttggagaatggtgcttcagttgaaaaaattagcagcaacttagaa
catgaaaaaccaagtgtagaagaatcaactattttaccaacaaaaaccattaatcaggct
catattaatgaactggattccttgatttgttttgatgaaaaaccagaaaccccccctatt
cagatggagattataagacagccctccccaccccctgttttagctgaggtccaagatttg
attcctacagcatcacctccggtcactgatgcagggcctgcttccttaaaagtaaattcc
actgatggtgtcgttgtttctgaatccccccttgagttacacatttccacgaaactgatg
gacaatttcatgaagatggcaaagtcaaatacagacaaaaacttagagacatgtggtatt
cttgctggttcactaaaaaaccgaaaattctatgttacagcactcatcattccaaagcaa
gaagccacaacagactcgtgtcaggctacaaatgaggaggaaatatttgaagtgcaggac
aaaagatcgttattcccccttggatggatacacacacatccaacacaatcttgtttcatg
tcatcaattgatgttcatacacactacgcatatcagattatgttgcctgaggccatcgca
atcgtcatggcaccaagagatagttcaagaaagcacggcattttccgcttgacgacacct
ggcggtatgggagtgattagaagctgtccgcatcgaggtttccatgcacacgatgcacct
tcagatggcagtccaatttataaacaatgtacagatgtttatatcgaccccaagttgaag
tttgatgttattgatttgcgctga
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