Lactuca sativa (garden lettuce): 111903877
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Entry
111903877 CDS
T05352
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
lsv04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111903877
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111903877
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111903877
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111903877
03036 Chromosome and associated proteins [BR:
lsv03036
]
111903877
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111903877
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111903877
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111903877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
111903877
NCBI-ProteinID:
XP_023755412
LinkDB
All DBs
Position
9:55609383..55613580
Genome browser
AA seq
530 aa
AA seq
DB search
MDMDYHGDMGRLDPELLQLNEVSSLAIKSNSYVAEKLFEQWLSLPETTLLVKSLVSKAKS
GLTLNVSAASSSPKSACSNSVPPLSPRSSSGSPRVTKQRAGPSVLSSPLKVVSEPVKEFI
PQFYFQNGRPPPNDLKDKCLTRTNQFFYGHANGLSLEEFKPVTKEICMLPSFFSSTLFKK
IDVASTGTVTRDAFVDYWINGNMLTKDTATQIYTLLKQPDLRYLTQEDFKPILRELLATH
PGLEFLQSTPEFQERYAETVIYRIFYYENRVGNGRLTLRELKRGKLIAAMMHADEEEDIN
KVLRFFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTS
EVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVLTRNELQFFYEEQLHRMEC
MAQEPVLFEDILCQIVDMIKPQEEAYFTLQDLKGSKLSGSTFNILFNLNKFMAFESRDPF
LIRQERENPTLTEWDRFAHREYIRLSMEEDADDASNGSGDVWDESLEAPF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggatatggattatcatggcgatatgggtcgtcttgaccccgaattgttacagctaaat
gaagtgtcttctttggctatcaagtcaaattcttatgttgccgagaagctgttcgagcaa
tggctttcgcttcccgaaaccactctcttggtgaagtctttggtaagcaaggctaaatca
gggcttacattgaatgtatctgcagcaagttcaagccctaaatctgcttgtagcaactct
gtgcctccactttcaccacgaagctcttctggttcgccacgtgtcacaaaacaaagggcg
ggcccctctgttttaagttctcctttgaaagtagtcagcgagccagtcaaagagttcata
cctcagttttattttcagaatggacgcccaccccctaatgatttgaaagataaatgtttg
actagaaccaatcagttcttttatggtcatgctaatggattatcattggaggaatttaag
cctgttacaaaggaaatatgcatgctgccatcattcttttcctccactctttttaaaaag
attgatgttgccagcactggcactgtaaccagggatgcatttgtggattattggattaat
ggcaacatgctgacaaaagacactgcaactcagatttatacattactaaagcagcctgat
ttgagatatttaactcaggaggatttcaagcccatacttcgagaacttttggcaactcat
ccagggttggaattcttacagagcacacctgaatttcaagagagatatgctgaaacggta
atatacagaattttttactatgagaatagagtgggaaatgggcgtcttaccctcagggaa
ctcaagagaggtaaattaattgctgcaatgatgcatgctgatgaagaagaggacataaac
aaagttttgaggttcttctcttatgaacacttctatgtaatatattgcaagttctgggag
ctggatacagatcatgatttcttgattgataaagagaaccttatcagatatggcaaccat
gcgttgacctacaggattgttgaccgaatattctctcaggttccaagaaagttcacgagt
gaagtcgagggtaaaatgggatatgaagattttgtttactttattttatctgaagaggat
aaatcatctgagcctagtcttgaatactggtttaaatgcatagatttggatggaaatggg
gtgctgactaggaatgaattgcaattcttctatgaagaacagttgcataggatggaatgc
atggctcaagagcctgttctttttgaggacattttatgtcaaatagttgacatgattaaa
ccacaggaagaggcttattttacattacaagacttgaaaggaagcaagctctctggaagc
actttcaatatcctctttaaccttaataagttcatggcctttgaatcccgtgaccccttt
ctcattcgccaggaacgtgagaatccaacattgactgaatgggatcggtttgcacatcgg
gaatatataaggctttcaatggaggaagatgcagatgatgcatctaatggtagtggggat
gtatgggatgagtctcttgaggccccattttga
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