Lactuca sativa (garden lettuce): 111903944
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Entry
111903944 CDS
T05352
Symbol
LOC111903944
Name
(RefSeq) glutamate receptor 1.2 isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111903944 (LOC111903944)
Ion channels [BR:
lsv04040
]
Ligand-gated channels
Glutamate (ionotropic)
111903944 (LOC111903944)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Toprim_3
YjeF_N
CPP1-like
Motif
Other DBs
NCBI-GeneID:
111903944
NCBI-ProteinID:
XP_042753878
LinkDB
All DBs
Position
9:complement(17570680..17575823)
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AA seq
844 aa
AA seq
DB search
MMNCRLFPFLTLMLLSFQSLLAAHEDPTYKEVQVGVILDMESGVGKVIYRCISMAISDFY
TANPHYTTRIAFTTRDTKGEPLRALSAALDLLENTKVQAIIYPKSTVLEYKANIPILSLS
TSPFSNRNPNLLGIAQDENSQFKGIAAMVELFKANNVIVICEDTANGREMATYMAREFQE
KNIHVTYTSLISTSDSNQQVREELHKLQTMQDTVFIVHTPPSLASNLFSMAKELGMMGEG
YMWIVTSKTMDLLGSMDAEAIESMQGAVGFRSYFPSSKELHNFLLKWRKEHYALNPFMEV
DSNGIWAYDAVYALAMAIERKQTREYASKDLGSNIDTSLLLDEMLRVRFHGLGGEFKLMN
GRIITKVMEVVNVVGKGDRRVGFWMMATGGGFMKEIKKPNSPSNQGLEIIIWPGGTTSIN
PKRRKLQTNGNKKLRILFPGSSRFQNLAQISVDPRTNLSVLSGFCGDVFNAAFNSLGYGV
GIEVVPFSYKDGITYNDVIKKIYLKEYDAAIGDFTITSNRSLYVDFTLPFTDLGVGIIAR
NAKDSMWIFLDPLSANLWITTSCFFIFLGFVIWFIEHRTNEEFQGSAPQQLGTTLWFAFS
TLVYAHREKLQSNLSRFVVTVWVFVVLVLTSSYTATLSSVLTVQQIGMKEISTGFFHGLS
PLGVVNNKLNAVEAWSEKLYAPEDYAKALTSGKVEAIVAEILYIKSFLAMFSGSDFSLIA
TAPTTNGFGFVFQKGSPLATEMSTHIAKMREDGTLKALEDKWLKHKSAVMSKEFSSPSPK
ILNLYGLRGLFIISGVSMALALSVSMIELVCEKWHIKDKIKMLRCVLHRSSEIHAHDSDV
ESTV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattgcaggttatttccatttctgacattgatgttgcttagctttcaaagcctt
ttagcagcacatgaagatccaacttataaggaagtacaagtgggagtgattcttgacatg
gaatcgggggtagggaaggtcatttatcgttgcatcagcatggctatttctgacttttac
acagccaatcctcactacacaacaagaatagcttttacaaccagggatacaaaaggagaa
ccactgcgtgccttgtctgctgctctggatcttttggagaacactaaagtgcaagcgata
atatatcccaaatcaacagttctggaatacaaagctaacataccgattctttccttgtca
acaagtcccttttcaaataggaatcctaatcttcttggaatcgcacaagatgaaaacagt
cagttcaaaggcattgctgccatggttgaattgtttaaagcaaataatgtgattgttatc
tgcgaggacactgcaaatgggagagaaatggctacttatatggctagagagtttcaagag
aaaaacatacacgttacgtatactagcctaatttcaacatctgacagcaaccaacaagtc
cgggaagagcttcataagcttcaaactatgcaagacacggtgtttatagtgcatacacca
ccttctctagcatccaatcttttctccatggcaaaagagctgggaatgatgggtgaagga
tacatgtggattgtaacaagtaagactatggacttgttgggttccatggatgctgaagca
atcgaatcaatgcagggggctgtgggtttcagatcatattttccatcatcaaaggagctt
cacaactttttattgaaatggagaaaggaacattatgctttgaacccatttatggaggta
gattccaatggtatatgggcatatgatgcagtttatgcactagccatggctattgagagg
aaacaaactagagaatatgcttcgaaagacttgggtagcaatattgacacatcactactt
ttagacgagatgttaagagtcaggttccatggtttaggtggtgaattcaagcttatgaat
gggaggatcatcaccaaagtcatggaagtggtgaatgtggttggtaagggtgataggagg
gttgggttctggatgatggctactggtggcgggtttatgaaagaaataaagaaaccaaat
tccccttcgaatcaaggccttgaaattatcatctggccaggtgggactacaagcattaat
ccaaagcgtaggaagctacaaacaaatggtaataagaagctgagaattctgtttccaggt
tccagcagattccagaatttagcacaaataagtgttgatccaagaacaaatctatcggtt
ttgagcggcttctgtggggatgtcttcaatgctgcgtttaactccttaggctatggagtt
ggcattgaggttgttccattctcttataaggatggaattacttacaatgatgtgatcaaa
aaaatctatcttaaggaatatgatgctgctatcggggattttacaatcacatcaaataga
tctctctatgtcgacttcacgttgcccttcactgatcttggagttggcataatagcccga
aatgccaaggacagcatgtggatattcttagatcctctcagtgcaaatctttggatcaca
acttcttgtttctttatctttttagggtttgtgatctggtttatcgaacatcgtacaaac
gaagaatttcaaggttcagcaccacagcaattgggaacaaccctctggtttgccttttca
accctcgtttatgctcacagggagaagctgcaaagtaatctatcaagattcgtggttact
gtttgggtatttgtagtgcttgttctcacgtcaagttacactgcaactttgagttcagtt
ttaactgtacaacagattggaatgaaggagatctccaccggattcttccatggtctttcc
cctttaggtgttgtcaataacaaattgaatgctgttgaggcctggtcagagaaactatat
gcacctgaggactatgctaaagcactaacaagtggaaaagttgaagcaatcgttgctgag
atcctttacatcaaatcatttcttgcaatgttttcgggttctgatttctccttgattgca
acagcacctaccaccaacggttttggctttgtgttccagaaaggttcacctttggccaca
gagatgtcgactcatatagcgaaaatgcgtgaagacgggacactgaaagcattagaggat
aaatggttgaaacataaatctgcagtgatgtcaaaggaattttcttccccgtcaccaaaa
atcttgaatctttatgggcttcgaggtctctttattatcagtggtgtgtccatggcattg
gccctttcggtgtccatgattgaacttgtttgtgaaaaatggcacatcaaagataagatt
aagatgttgaggtgcgtcttacatagatcttcagaaatacatgcacatgatagtgatgtg
gaatcaacggtttga
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