KEGG   Lactuca sativa (garden lettuce): 111904126
Entry
111904126         CDS       T05352                                 
Name
(RefSeq) polyubiquitin 9
  KO
K03873  elongin-B
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111904126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111904126
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111904126
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     111904126
   Cul5 complex
     111904126
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111904126
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_5 Rad60-SLD_2
Other DBs
NCBI-GeneID: 111904126
NCBI-ProteinID: XP_023755671
LinkDB
Position
7:complement(73294279..73295720)
AA seq 104 aa
MAMYIRVKRNKTTYFLQCDATEKILDIKQKLHDLIDQPINDQRLILVASGEVLDDSKTLA
DQKVENDAVVALVLRKDDNEFEDVNIVKPDDFYQSRDADTTSNW
NT seq 315 nt   +upstreamnt  +downstreamnt
atggctatgtacattcgtgttaagcgcaataaaacaacttactttcttcaatgtgatgca
actgagaaaattctagacattaagcaaaagctgcatgacttaattgatcaaccaattaat
gatcaacgcctaattttagtagcaagtggagaagttttagatgattccaagactttagca
gatcaaaaggtcgaaaatgatgctgttgtggcacttgtgttgagaaaagatgacaatgaa
tttgaggatgtgaacattgtgaaaccggatgatttttatcagtcacgtgatgcggatact
acaagcaattggtaa

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