KEGG   Lactuca sativa (garden lettuce): 111904147
Entry
111904147         CDS       T05352                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 6B
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03020  RNA polymerase
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111904147
  09124 Replication and repair
   03420 Nucleotide excision repair
    111904147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111904147
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111904147
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111904147
  RNA polymerase III system
   RNA polymerase III
     111904147
  RNA polymerase I system
   RNA polymerase I
     111904147
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111904147
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 111904147
NCBI-ProteinID: XP_023755688
LinkDB
Position
1:complement(11649853..11651409)
AA seq 145 aa
MADDDYDMDAGGYDDEPAEPELDEGAEEEIDGDKVEEDVPDPLLGDNEDKEEQEAVEKPR
KTIKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLP
DGSYEDWGVDELIVEDSWKRQVGGD
NT seq 438 nt   +upstreamnt  +downstreamnt
atggccgacgatgactatgatatggacgctggaggttacgacgatgagccagccgaaccc
gaactcgatgaaggggctgaggaagagattgatggagataaagtggaagaagacgttccc
gatccacttttaggtgacaacgaagataaagaagaacaggaagctgtagaaaaacctcgg
aagacgataaagtatatgacgaaatatgaaagggctagaatcttgggtacccgtgcactt
caaattagcatgaatgctccagtgatggttgagcttgagggtgaaactgaccccctcgag
attgcaatgaaggagcttagacagaggaagatacccttcaccattcgtcgataccttccg
gatggaagctatgaagactggggagttgatgaactaatcgttgaggattcatggaagaga
caagttggtggggactag

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