Lactuca sativa (garden lettuce): 111904263
Help
Entry
111904263 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111904263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
111904263
NCBI-ProteinID:
XP_023755809
LinkDB
All DBs
Position
7:complement(154640882..154643428)
Genome browser
AA seq
625 aa
AA seq
DB search
MSRDPMDPLTILYKLSISLHHKIPCQTIEHKIEMATNVQRTSSASPAPEKHKEAIQFIEK
MTRNTDKVQANVLAEILSRNADTEYLRLYNLNGATDRETFKSKIPIVTYDDLQPIIQRIA
DGDRSPILSAHPISEFLTSSGTSAGERKLMPTIHEDLDRRQLLYSLLMPVMNLYMPGLDK
GKALYFLFVKSETQTPGGLLARPVLTSYYKSDHFKTRPFDPYNVYTSPNEAILCPDSFQS
MYAQMLCGLYDRKEVLRIGAIFASSLLRAIRFLQLNWKELCHDIRTGTLNETVSDPDIRQ
CMSQILRPNSDLANVIESECSKKNWERIIVRIWPNVKYLEVIVTGTMAQYIPTLDYYSGG
LPKVCTMYASSECYFGINLNPLCKPSEVSYTIMPNMAYFEFIPHNPHSVSTDNVVDLANV
EIGKEYELVITTHAGLYRYCVGDILRVTGFHNSAPQFHFVRRKDVLLSIESDKTDESELQ
SAIENASKLLKKFNTSVVEYSSYADTETIPGHYVIFWELLVKDPMNXPKEEVMEQCCLAM
EESLNAVYRQGRVECNSIGPLEIRVVKSGTFEELMDYAISRGASINQYKVPRCVSFTPVM
ELLNTRVVASYFSPSLPFWSPERRR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgaccccatggacccactaaccatcctatataaactctccatttctcttcac
cacaaaatcccgtgtcaaacaatcgaacacaaaatcgaaatggcgactaatgttcagaga
acgtcttccgcttcaccggcgccggagaaacataaggaagcgattcagttcattgagaag
atgacgagaaacacagacaaagttcaggcgaacgttttggctgagatactcagccggaac
gccgacacagaatatctccggctttacaatctcaacggagccaccgatcgtgaaactttc
aagtcgaagattccgatagtcacttacgacgacctgcaacctatcattcaacgcatcgcc
gatggtgatcgctctcccattttatcagctcatccgatttctgaatttctcaccagttct
ggtacttccgccggtgaaagaaagctcatgccgacgattcacgaagatttggatcgacgt
caactgctttacagccttctcatgcctgtaatgaacttgtacatgccaggtttagacaag
ggaaaagctttatactttctattcgtcaaatccgaaacacagactccgggtgggttactc
gcccgacccgttctcacaagctactacaaaagtgaccatttcaaaacccgacccttcgac
ccgtataacgtctacaccagcccaaacgaagcaattctttgccccgattccttccaaagc
atgtacgctcagatgctttgcggtctgtatgaccgcaaagaagtgctccgtatcggagca
atattcgcctcgagtttgctccgagccattcggttccttcaactgaactggaaggaactc
tgtcatgatatccggaccggaactctcaacgagacagtttctgatccggatatcagacag
tgtatgtctcagatactgagaccgaattcggatctcgcaaatgttattgaatccgaatgc
tcaaagaagaattgggaaagaattatcgttcgaatttggcctaatgtgaaatacctagaa
gtaattgtgaccggtacaatggctcaatacattccaaccctagattattatagtggcggg
ttaccgaaagtttgcacaatgtatgcatcttccgaatgttacttcgggattaacctcaat
ccattgtgtaaaccatcagaagtttcctacacaattatgccaaacatggcatatttcgag
ttcataccccacaatccacattcagtgtcaaccgacaatgtggttgatctagcgaatgtg
gaaatagggaaagagtatgaactcgtgatcaccacccatgcaggtctttacagatactgt
gtgggtgacatactgcgtgtcaccgggtttcacaactctgcaccacagttccattttgtg
agacgaaaagacgtgttgttaagcatcgaatccgataagactgacgaatccgaactacaa
tctgccattgaaaacgcgtccaaattgttgaagaagttcaacacgagtgtggtcgagtac
tcgagctatgcggataccgaaacaatcccgggtcattatgtgatattttgggagttgtta
gtgaaggatccaatgaatntacccaaggaggaggtgatggagcaatgttgcttggctatg
gaggaatcattgaatgctgtgtacagacagggtcgggttgagtgcaattcaatcgggccg
ttggagatccgagtggtgaaaagtggtacgtttgaagagttgatggattatgctatatca
agaggtgcatctattaaccagtataaagtgccgaggtgtgtaagcttcacacctgtaatg
gagttgctgaatacgagggtggtggcctcgtatttcagtccgagtttgccgttctggagt
ccggaacgtcgccggtga
DBGET
integrated database retrieval system
