KEGG   Lactuca sativa (garden lettuce): 111904551
Entry
111904551         CDS       T05352                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03420  Nucleotide excision repair
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111904551
  09124 Replication and repair
   03420 Nucleotide excision repair
    111904551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:lsv03051]
    111904551
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111904551
Proteasome [BR:lsv03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    111904551
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111904551
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Rad60-SLD Dsc3_N TECR_N CUE Rad60-SLD_2 Ubiquitin_4 UBA_RAD5A UBA_3
Other DBs
NCBI-GeneID: 111904551
NCBI-ProteinID: XP_023756072
LinkDB
Position
3:81728795..81732207
AA seq 379 aa
MKVFVKTLKGTHFEIEVKSEDTVADVKKNIENVQGDVYPAAQQMLIHQGKVLKDATTLEE
NKVAENSFIVIMLSKTKPTSGEASTAASAPKAPQTSATPPAQAATQAPPPVTQPVSAPSP
APPASDPAPVVNATTGNVYDQVASNLVSGSNLEGTIQHLLDMGGGNWDRDTVVRALRAAF
NNPERAVEYLYSGIPEPAELPPAAGVSPLPGLQAAQPPPAAVVPPSGPNSNPLDLFPQGL
PDMGANAPAGAAGNLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQ
ADFLRLINEPVEGGENVLGDLAAAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFFACN
KNEELAANYLLDHMHEFED
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaaggtttttgtgaaaacattgaaggggactcacttcgaaatcgaagtaaaatccgag
gacacggttgctgatgtgaagaaaaatatagaaaatgttcagggagatgtttatcctgct
gcacaacaaatgcttatccatcaaggcaaagtgcttaaagatgccaccaccttagaagaa
aacaaagtggctgaaaattctttcattgtcatcatgttatccaagactaagccaacctct
ggtgaagcttcaacagcagcatccgccccaaaggcacctcagacaagcgcaactccccct
gcacaagcagccactcaggctccgccacctgtcacacagcctgtgtctgctccttcacct
gctcctccagcttccgatccagcacctgttgtgaatgccacgactgggaatgtatacgat
caagtagcatcaaatcttgtatcaggaagtaatttagaaggtacaattcaacatcttctt
gatatgggaggaggaaactgggatagggatactgtcgttcgtgctcttcgtgctgctttc
aataatccagaaagagctgttgaatatctctattctggtataccggagccagcagaactc
ccgccagctgccggagtttcaccactgccaggtctgcaggctgctcagcccccgccagct
gcagtcgttcctccaagtggaccaaattcaaaccctttggatctcttccctcagggactt
cctgacatgggcgcaaatgctcctgctggtgctgctggcaacctggattttcttcgtaac
agtccacagtttcaagcacttcgagccatggtgcaggctaatccccaaatcttgcagcct
atgctacaagagttggggaagcaaaatccacacctggtgagactgattcaagagcatcaa
gctgatttccttcgtttgatcaatgagcctgttgaagggggagagaacgtacttggagat
cttgctgcagcgatgccacaggctgtgactgttactcctgaggaacgtgaagccattgaa
cgccttgaagcaatgggatttgatagagcactagtgttagaggtgtttttcgcatgcaac
aagaatgaagagcttgcagctaattacctgttagatcatatgcatgagtttgaagactag

DBGET integrated database retrieval system