Lactuca sativa (garden lettuce): 111904551
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Entry
111904551 CDS
T05352
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03420
Nucleotide excision repair
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111904551
09124 Replication and repair
03420 Nucleotide excision repair
111904551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsv03051
]
111904551
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111904551
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111904551
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111904551
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Dsc3_N
TECR_N
CUE
Rad60-SLD_2
Ubiquitin_4
UBA_RAD5A
UBA_3
Motif
Other DBs
NCBI-GeneID:
111904551
NCBI-ProteinID:
XP_023756072
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Position
3:81728795..81732207
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AA seq
379 aa
AA seq
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MKVFVKTLKGTHFEIEVKSEDTVADVKKNIENVQGDVYPAAQQMLIHQGKVLKDATTLEE
NKVAENSFIVIMLSKTKPTSGEASTAASAPKAPQTSATPPAQAATQAPPPVTQPVSAPSP
APPASDPAPVVNATTGNVYDQVASNLVSGSNLEGTIQHLLDMGGGNWDRDTVVRALRAAF
NNPERAVEYLYSGIPEPAELPPAAGVSPLPGLQAAQPPPAAVVPPSGPNSNPLDLFPQGL
PDMGANAPAGAAGNLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQ
ADFLRLINEPVEGGENVLGDLAAAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFFACN
KNEELAANYLLDHMHEFED
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtgaaaacattgaaggggactcacttcgaaatcgaagtaaaatccgag
gacacggttgctgatgtgaagaaaaatatagaaaatgttcagggagatgtttatcctgct
gcacaacaaatgcttatccatcaaggcaaagtgcttaaagatgccaccaccttagaagaa
aacaaagtggctgaaaattctttcattgtcatcatgttatccaagactaagccaacctct
ggtgaagcttcaacagcagcatccgccccaaaggcacctcagacaagcgcaactccccct
gcacaagcagccactcaggctccgccacctgtcacacagcctgtgtctgctccttcacct
gctcctccagcttccgatccagcacctgttgtgaatgccacgactgggaatgtatacgat
caagtagcatcaaatcttgtatcaggaagtaatttagaaggtacaattcaacatcttctt
gatatgggaggaggaaactgggatagggatactgtcgttcgtgctcttcgtgctgctttc
aataatccagaaagagctgttgaatatctctattctggtataccggagccagcagaactc
ccgccagctgccggagtttcaccactgccaggtctgcaggctgctcagcccccgccagct
gcagtcgttcctccaagtggaccaaattcaaaccctttggatctcttccctcagggactt
cctgacatgggcgcaaatgctcctgctggtgctgctggcaacctggattttcttcgtaac
agtccacagtttcaagcacttcgagccatggtgcaggctaatccccaaatcttgcagcct
atgctacaagagttggggaagcaaaatccacacctggtgagactgattcaagagcatcaa
gctgatttccttcgtttgatcaatgagcctgttgaagggggagagaacgtacttggagat
cttgctgcagcgatgccacaggctgtgactgttactcctgaggaacgtgaagccattgaa
cgccttgaagcaatgggatttgatagagcactagtgttagaggtgtttttcgcatgcaac
aagaatgaagagcttgcagctaattacctgttagatcatatgcatgagtttgaagactag
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