KEGG   Lactuca sativa (garden lettuce): 111904573
Entry
111904573         CDS       T05352                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111904573
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111904573
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 111904573
NCBI-ProteinID: XP_023756092
LinkDB
Position
3:complement(82664046..82668482)
AA seq 555 aa
MATETSRSSSSSADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLTNVRSFGTEGRKK
DGPQLMPSDKVYEYILFRGSDIKDLQVKSSQPVQPTQSINSDPAIIQSHYPRPPTTSSTA
GGPTTNNLGQPGSTYPLYQPGGNIGSWAPSPSPLPPNPNTSGPTMPMYWPGYYAPPPQLH
QQSLPRPPQGLPMPPSLQYPTFNPPPASSEPLNFPEYPSPLLPTSSPLPSSFTGSLPSLM
HNKTPNPSAPPLPGGATMQPPPAVTSDVLSGAKFPFQGMSQAMGGPTEPPTPLLVTPGQL
LQSVPTTVSPPPVHDDVEVVPVSSMTSSSSSPPPPPLSVPVSVPEAQPPILPLPTQSQIA
QKPNGSSYQNRHNYNYRGRERGRGSAGGSRPVMKFTEEFDFNAMNEKFNKDEVWGTLGKT
NRSGSKEKDGNVTDEEESEEETDPNLPKVEVKPVYSKDDFFDSLSSNSLDRQSNYGRTRF
SEQMKLDTETFGEFSRYRGGGRGGRGPYRGGRGRGGGGGYYGRGYGYVGRGRGGRNQNPN
PNPNQNQNQNDMRDY
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcgacagaaacttctagatcttcaagttcatcggcagattcgtacattggaagctta
attagcttgacttccaagagtgaaattagatacgagggcattttgtataatatcaacacc
gaggaatcctccatcggattgaccaacgtaagatcgtttggaactgaagggcgaaaaaaa
gatggcccacaactcatgcccagtgacaaggtttatgagtacatattatttcgtggaagt
gatatcaaggatcttcaggtgaaatcatctcaacctgttcaacccacacaatccataaac
agtgatcctgccataattcagtcacattatcctcggccacctacaacatcttcaaccgcg
ggtggtcccaccaccaacaatcttggtcaacccgggtcaacatatcctttatatcaaccc
ggtggaaatatcgggtcgtgggccccatcaccatcaccactacctccaaacccaaacact
tccgggcccacaatgccaatgtactggccaggatactatgccccaccaccacagttacac
caacaatcactccctcgaccaccacaagggttaccaatgccgccttcactacaatacccc
actttcaatccaccacccgcgtcatctgaacccctaaatttcccagaatacccttctcct
ttattgccaacatcatcaccactcccttccagtttcaccggatctctcccttctttgatg
cataacaaaactcctaacccttccgctccaccactgccaggtggcgccaccatgcaacca
ccacctgctgtcaccagtgatgtgctttctggtgcaaagtttccttttcaggggatgtct
caggcaatgggtgggccaactgaaccacctacaccattgctggtgacgccaggtcagctt
ctgcagtctgtccctactactgtttccccgccacctgtacatgatgatgtggaagttgtt
ccggtgtcgtcgatgacatcatcatcatcatcaccaccaccaccaccactgtctgttcct
gtttcagtgccagaagcacagcctccaattctgccattaccaactcaatctcaaattgct
caaaagcctaatggatcaagttaccagaatcgccataattacaattacagagggcgtgaa
agaggcagaggatcagccggggggtcacgacctgtgatgaaatttactgaggagtttgat
tttaatgcaatgaatgagaaattcaacaaggatgaagtgtggggtactttgggaaaaacc
aacagatctggttcaaaggagaaagatggaaatgttactgatgaggaagaatcagaagag
gaaaccgatcccaacttacctaaagttgaagtcaagcctgtttatagcaaggacgacttt
ttcgattcgttatctagcaactcactcgatcgtcaatcaaattacggaaggactagattc
tctgaacaaatgaaactagatacagagacatttggagaattttctagatacagagggggt
ggaaggggtgggcgtgggccctaccgtggagggcgtgggcgaggtggcggcggtggttat
tatggaagagggtatgggtatgttgggcgggggcgcggtggcagaaatcaaaatccaaat
ccaaatccaaatcagaatcagaatcagaatgatatgcgtgattattga

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