Lactuca sativa (garden lettuce): 111905023
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Entry
111905023 CDS
T05352
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111905023
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111905023
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111905023
Membrane trafficking [BR:
lsv04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
111905023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
GrpE
Motif
Other DBs
NCBI-GeneID:
111905023
NCBI-ProteinID:
XP_023756475
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Position
7:50734264..50741190
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AA seq
995 aa
AA seq
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MDPKPSPRSGRFAPINRHNSTPSSLLSKSLSDASTQNLSSILNNPHVSDGSWVGWWSSST
AVQVAEFAPPSANKTPGLEITRSDFTSYLSSISDHHSRFEDIRNHSNKESRDADAIDHHE
RAGEALVACLREVPSLYFKEDFALEDGATFRAASPFSTIAENTVLQEKLSQYLDVVELHL
VKEISLRSNSFFEAQGQLEDLNLKIVEGCSRIRELKETIRLLDVDLVDSARQIQELNHTR
SDMLALQEKLRLILYVNQSLAALKLLVASADCAGALDVTDDLKHFLDGDQLTGLHCFRHL
EDHVAAAIDSVNRLVSTSFIYLFILLEFSVVTCIIYFCSILSTEFLRASINDSGDKDVVI
LTKAKAKMTPLGNGEDNEVNLHEEDTSSFHDRLLPLIIGLLRTAKLPTVLRIYRDTVTSD
MKTAIKSVVAELLPVLLARPLDSDFKSNDRIVDSDGGGSSLASKLRSLSSESFVQLLGTI
FKIVQAHLLRAAEVKKAIEWIMSNLDGHYAADSVAAAIAHGALNSENAPLGDSQSGSFPR
NSIKVSPIQPKSNDATSPSNLSKNFRADVLRENTEAVFAACDAAHGRWAKLLGVRALLHP
RLRLQEFLQIYNVSQEFVTATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMTKLKAVLD
QETWVEVDVPNEFQGIVDSLFSLESIGVGDSDDKSYNEQAVDGIVDTTGQVNNVKTKNEH
GKSGAHLISFRGVGYHMVNCGLILLKMLSEYIDMNAVLPALSSEVIHRVLEMLKFFNTRA
CQLVLGAGAMQVSGLKSITSKHLALASQVVSFVHAIIPEIRRILFLKVPETRKVMLLSEI
ERVSQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIIETWNRSDETDVQPSQFAKSLTKE
VGYLQRVLSRTLHEADVQEIFKEVTIIFDIQISDAFSHVDITNQQIKTRLNCDIQHILGC
IRSLPSAKLSSESGAPLAGQLESLVQKISAEAADQ
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagccttcccccagatcgggaaggttcgcccctattaatcgacataattct
accccttcctccttgctatcgaaatcactttccgatgcaagtacccaaaacttatcctcc
atcctcaacaacccacatgtctccgacggctcttgggtcggttggtggtcgtcttcaact
gctgtacaagtcgctgaatttgctcctccttccgccaacaaaacccctggtttagaaata
actagatccgatttcacatcatatttatcctcaatctccgatcaccatagccgtttcgaa
gacattcggaaccattcaaacaaggagagcagggatgcggatgccattgatcaccatgag
agggcaggggaagctctcgttgcgtgtttgcgggaagttccttcattgtatttcaaggag
gattttgcactcgaagatggagcaactttcagggcggctagcccgttctctactatcgct
gagaacaccgtgttacaagaaaagttgtctcagtacttggatgtggtcgagcttcatttg
gttaaggagatctcgctgcgttccaattcgttttttgaagcacagggtcagttagaagat
ttgaatcttaagattgttgaagggtgtagtcggatccgggaattgaaggagacgattagg
cttttggatgtagatttagtggattcagctcgccaaattcaggagttaaatcatacccgg
agcgatatgttggcactgcaggagaagcttaggctaatattatacgttaaccaatctctt
gctgctcttaagttgcttgttgcatctgctgattgtgcgggagctttagacgtgactgat
gatttgaagcattttctggatggggatcaattaactggcctacattgttttcgtcacctt
gaggatcatgtagctgctgcaatagattctgtaaataggttagtatccacatcatttatt
tatttatttattcttttagaattctctgttgtgacttgtattatttatttttgtagcatt
ctttcaacagagtttttgcgtgcatctatcaatgattctggagataaggatgtggttata
ttaactaaagcaaaagcaaagatgaccccactgggaaatggagaagataatgaagtaaac
ttgcatgaagaagacacctcaagcttccatgatcgacttttacctcttattattggctta
cttagaactgcaaaacttccaactgttttgagaatatatcgcgatacagttacatctgac
atgaaaactgctataaaatcggttgttgcagagctgcttcctgttcttcttgcaagacct
ttagactctgattttaaatcaaacgatcgaattgttgattcagatggtggaggctcatca
cttgcaagtaagttaagaagcttgtcttctgaaagctttgttcaacttcttggcaccatt
ttcaagattgtacaggcacacttacttcgagctgctgaagttaaaaaagccattgaatgg
ataatgtccaatcttgatggtcattatgctgctgattcagttgctgctgcaattgctcat
ggtgctttaaattccgaaaatgcccctctgggtgattctcagtctggatcctttcctagg
aattctatcaaggtgtccccaatccaaccaaaatcaaacgatgccacaagtccctcaaat
ttatcaaaaaatttcagagctgatgtattgagagaaaacacagaagcagtgtttgcagct
tgtgatgcagctcatggaagatgggcaaaacttcttggtgtgcgtgctcttttgcatcca
aggctaaggcttcaagagtttttacaaatatataacgtgtcacaagaatttgttactgca
acagagaagattggtggaaggttgggatatagcatccgtggaacattacagtctcaagcc
aaagcttttgttgatttccaacatgaatctcggatgacaaaactgaaagcagtgcttgat
caagaaacatgggttgaagtagatgtgcctaatgaattccagggaattgtggattccctt
ttcagcttggaatctataggagttggtgattccgatgataaaagctacaatgaacaggct
gttgatggaattgtggataccactggacaggttaataatgttaaaacaaagaatgaacat
ggaaaatctggtgctcatttgatctcattcagaggtgttgggtaccacatggtaaactgt
gggttaatcttgttgaagatgttatcagagtacattgatatgaatgctgttttgccagca
ctttcatctgaagttattcatcgtgttcttgaaatgttgaaatttttcaacacaagggct
tgtcagcttgttcttggtgctggtgccatgcaggtgtctggtttaaagtcgattacatca
aaacatctggcattggcaagtcaggttgtgagttttgtgcatgctattatccctgaaatt
aggaggattcttttcctgaaagtacctgagacacgaaaagtaatgctgttatcagaaatt
gaacgcgtatcacaggattataaagtgcatagagatgagatacatacaaaactggtgcaa
ataatgagggaaaggctgttagttcatcttcgtggattacctcaaattattgaaacatgg
aatcgatcagatgaaactgatgtacaacccagtcagtttgctaaatccctcaccaaggaa
gttggatatcttcaacgtgtgctttcacgaactttgcatgaagctgatgttcaagaaata
ttcaaagaagtgacaatcatctttgacatacaaatatctgatgctttttcacacgtggat
attaccaatcaacaaataaagaccaggctgaattgtgatatccagcatatccttggatgc
ataagatcattgccatcagccaagttaagtagtgagtcgggggccccacttgcaggtcaa
cttgagtctttggtccaaaaaatatctgctgaagctgctgatcaataa
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