Lactuca sativa (garden lettuce): 111905286
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Entry
111905286 CDS
T05352
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111905286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111905286
Spliceosome [BR:
lsv03041
]
Complex B
Other components
Prp19-related factors
111905286
Complex C
111905286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
111905286
NCBI-ProteinID:
XP_023756747
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All DBs
Position
8:complement(152351228..152353172)
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AA seq
595 aa
AA seq
DB search
MAALKEFLPPAKSSSSTFYDHASDPWFKRRYSTPTENEHAEIIKNKNNSVPLYNTSERLK
YRPLKPHDFGDGGAFPEIHYAQYPLDLGRKKYSSSGPKTLPVTVDKHGNLTFDAIVKQNE
NASKIVHSQHKDLVPKILKDEEDEEEVEKQKKIEETTLQTKAALERIVNVRLSAAQPKHV
TTQSQDSKFIKYKPSQQSSAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKANGLPPVP
VMHSPPRPVTVKDQQVWKIPPCISNWKNQKGYTIPLHKRLAADGRGLQDVQINDNFAKLS
EAFYVAQQKSREAVSLRSKLQKETMMQEKERKEQELRALAQKARSERTGTATGAPPAAPP
PPPSGKTMMDVDERETRETREERIQREKIREERRRERERERRLEAKDAAMGKKSKITRDR
DRDISEKVALGMASGGAARGGEVMYDQRLFNQEKGMDSGFGTEDQYNVYDKGLFTAQPTL
STLYRPKKDADGEMYGGADEQIEKIRKTDRFKPDKGFTGANEKAGPRDRPVEFEKEVAEE
ADPFGLDQFLTQVKGGKKAMDKVGSSGTMKASGGASMREGYEGSGRSRIGFERGR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttgaaggagtttttgccacctgcaaaatcatcttcttccaccttctatgat
catgcaagcgatccatggttcaagcgaagatacagtaccccaacagagaatgaacatgct
gaaatcatcaaaaacaaaaacaactctgtcccattatacaacacatctgagcgtttaaag
tatcgaccattgaaaccacacgactttggtgatggtggagcttttcccgagatacactat
gcacagtaccctcttgatcttggtaggaaaaaatattcatcttcaggcccaaaaacccta
cctgtaacagtcgataaacatggtaatctaacatttgatgcgatcgtgaagcaaaacgaa
aacgcatcaaagattgtacattcacagcacaaagatcttgtacccaagattctaaaggat
gaagaagacgaagaggaagtggagaagcagaaaaagattgaagaaacaacccttcaaaca
aaagcagctctcgaaaggattgtgaatgtaagactaagtgcagcacaacccaaacacgtt
accacacaatctcaagattcaaagtttatcaaatacaaaccctcacaacaatcatccgca
tttaactcaggggcaaaagaaagaatcattagaatggtggaaatgccagttgacccatta
gacccaccaaagttcaaacacaaaagagtcccaaaagctaacgggttgccacctgtccct
gtcatgcactcccctcctagacccgtaacagtaaaagaccaacaagtttggaagatccct
ccgtgtatttcaaactggaagaatcaaaaagggtacacaattcctcttcataaacgtcta
gcagccgatggaagagggcttcaagacgtacaaatcaacgataattttgccaaactttca
gaagctttttatgtagctcaacaaaaatctagagaagctgtctccttgaggtcaaaactc
caaaaggaaacaatgatgcaagaaaaagaaagaaaagaacaagaacttcgcgcattagct
caaaaagcaagatccgaaagaaccggcactgcaaccggagcacctcccgccgccccaccg
ccaccaccctccgggaagaccatgatggatgttgacgagagagaaacaagagagacaaga
gaggagaggattcagagagagaagattcgggaggagaggaggagagagagggagagagag
agaagactggaagcgaaagatgcagcaatggggaaaaagagtaagataacacgggacaga
gaccgtgacatcagcgagaaggtggcgctggggatggcgtcaggaggggcggcgcgtggt
ggtgaagtgatgtacgatcagcggttgtttaatcaagagaaagggatggattcagggttt
gggacagaggatcaatacaatgtttatgacaaaggattgtttacagctcagcctactctc
tccaccttataccgccctaagaaggatgctgatggtgagatgtatggtggggcggatgag
cagattgagaagattaggaaaacggatcgatttaaaccggataaagggttcacgggtgcc
aacgagaaagcgggtcccagggatagacccgttgagtttgaaaaagaagtcgctgaagaa
gcggatccatttggtttggatcagtttttgacccaagtcaaaggagggaagaaggcgatg
gataaagttggaagcagtgggaccatgaaagcaagtggtggggcttctatgcgtgaaggg
tatgaaggttctggaaggagtcggattgggtttgaaagggggcgatag
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