Lactuca sativa (garden lettuce): 111905288
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Entry
111905288 CDS
T05352
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111905288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111905288
Spliceosome [BR:
lsv03041
]
Complex B
Other components
Prp19-related factors
111905288
Complex C
111905288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
111905288
NCBI-ProteinID:
XP_023756749
LinkDB
All DBs
Position
8:152320008..152322683
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AA seq
605 aa
AA seq
DB search
MAALKELLPPAKSSSSTFYDHSSDPWFKQRYSAPTEDEHTEIIKKNPVPLYNTPERFKYR
PSKPQDFGDGGAFPEIHYAQFPLDLGRKKDSSSGPKTLPVTVDKHGNLTFDAIVKQNENA
SKIVHSQHKDLVPKILKDEEDEEDEEEVEKQKKIEETTLQTKAALEKIVNVRLSAAQPKN
VTTQSQDSKFIKYKPSQQSSAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKANGSPPV
PVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKL
SEALYVAEQKAREAVSMRSKVQKEMMMKEKERKEQELRALAQKARSERTGTATGPPPAAP
PPPPSGKSMMDVDEREPREPRETRETREEREERIQREKIREERRRERERERRLEAKDAAM
GKKSKITRDRDRDISEKVALGMASGGAARGGEVMYDQRLFNQEKGMDSGFGTEDQYNVYD
KGLFTAQPTLSTLYRPKKDADGEMYGGADEQIEKIRKTDRFKPDKGFTGANEKAGPRDRP
VEFEKEVAEEADPFGLDQFLTQVKGGKKAMDKVGSSGTMKASGGASMREGYEGSGRSRIG
FERGR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttgaaggagcttttgccacctgcaaaatcatcttcttccaccttctatgat
cattcaagcgacccatggtttaagcaaagatacagcgccccaacagaggatgaacatact
gaaatcatcaaaaagaaccctgtcccattatacaacacacctgagcgtttcaaataccgg
ccctcaaaaccacaagactttggtgatggtggagctttccccgagatacactatgcacag
ttcccccttgatcttggtaggaaaaaagattcatcttctggaccaaaaaccctacctgta
acagtcgataaacatggtaacttaacatttgatgcgatcgtgaagcaaaatgaaaacgct
tcaaagattgttcactcacagcacaaagatcttgtacccaagattctaaaggatgaagaa
gatgaagaagatgaagaggaagtggagaagcagaaaaagattgaagaaacaacccttcaa
acaaaagcagctctcgaaaagattgtgaatgtaagactaagtgcagcacaacccaaaaac
gttaccacacaatctcaagattcaaagttcatcaaatacaaaccctcacaacaatcatcc
gcgttcaactcaggggcaaaagagagaatcattagaatggtggaaatgccagttgaccca
ttggacccaccaaagttcaaacacaaaagagtcccaaaagctaacgggtcgccacctgtc
cctgtcatgcattcccctcctagacccgtaacagtaaaagaccaacaagattggaaaatc
cctccatgtatttcaaactggaagaatccaaaagggtacacaattccacttgataaacgt
ttagcagcagatggaagagggcttcaagaggtacaaatcaatgataattttgccaaactt
tcagaagctttatatgtagctgaacaaaaagcaagagaagctgtttccatgaggtcaaaa
gtccaaaaggaaatgatgatgaaagaaaaagaaagaaaagaacaagaactccgcgcatta
gctcaaaaagcaagatccgaaagaaccgggaccgcaaccggaccacctcctgccgcccca
ccgccgcctccctccgggaagagcatgatggatgttgacgagagagaaccaagagaacca
agagaaacaagagagacaagagaggagagagaggagaggattcagagagagaagattcgg
gaggagaggaggagagagagggagagagagagaagactggaagcgaaagatgcagcaatg
gggaaaaagagtaagataacacgggacagagaccgtgacatcagcgagaaggtggcgctg
gggatggcgtcaggaggggcggcgcgtggtggtgaagtgatgtacgatcagcggttgttt
aatcaagagaaagggatggattcagggtttgggacagaggatcaatacaatgtttatgac
aaaggattgtttacagctcagcctactctctccaccttataccgccctaagaaggatgct
gatggtgagatgtatggtggggcggatgagcagattgagaagattaggaaaacggatcga
tttaaaccggataaagggttcacgggtgccaacgagaaagcgggtcccagggatagaccc
gttgagtttgaaaaagaagtcgctgaagaagcggatccatttggtttggatcagtttttg
acccaagtcaaaggagggaagaaggcgatggataaagttggaagcagtgggaccatgaaa
gcaagtggtggggcttctatgcgtgaagggtatgaaggttctggaaggagtcggattggg
tttgaaagggggcgatag
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