KEGG   Lactuca sativa (garden lettuce): 111905288
Entry
111905288         CDS       T05352                                 
Name
(RefSeq) SNW/SKI-interacting protein A
  KO
K06063  SNW domain-containing protein 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111905288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsv03041]
    111905288
Spliceosome [BR:lsv03041]
 Complex B
  Other components
   Prp19-related factors
    111905288
 Complex C
    111905288
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 111905288
NCBI-ProteinID: XP_023756749
LinkDB
Position
8:152320008..152322683
AA seq 605 aa
MAALKELLPPAKSSSSTFYDHSSDPWFKQRYSAPTEDEHTEIIKKNPVPLYNTPERFKYR
PSKPQDFGDGGAFPEIHYAQFPLDLGRKKDSSSGPKTLPVTVDKHGNLTFDAIVKQNENA
SKIVHSQHKDLVPKILKDEEDEEDEEEVEKQKKIEETTLQTKAALEKIVNVRLSAAQPKN
VTTQSQDSKFIKYKPSQQSSAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKANGSPPV
PVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKL
SEALYVAEQKAREAVSMRSKVQKEMMMKEKERKEQELRALAQKARSERTGTATGPPPAAP
PPPPSGKSMMDVDEREPREPRETRETREEREERIQREKIREERRRERERERRLEAKDAAM
GKKSKITRDRDRDISEKVALGMASGGAARGGEVMYDQRLFNQEKGMDSGFGTEDQYNVYD
KGLFTAQPTLSTLYRPKKDADGEMYGGADEQIEKIRKTDRFKPDKGFTGANEKAGPRDRP
VEFEKEVAEEADPFGLDQFLTQVKGGKKAMDKVGSSGTMKASGGASMREGYEGSGRSRIG
FERGR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcggctttgaaggagcttttgccacctgcaaaatcatcttcttccaccttctatgat
cattcaagcgacccatggtttaagcaaagatacagcgccccaacagaggatgaacatact
gaaatcatcaaaaagaaccctgtcccattatacaacacacctgagcgtttcaaataccgg
ccctcaaaaccacaagactttggtgatggtggagctttccccgagatacactatgcacag
ttcccccttgatcttggtaggaaaaaagattcatcttctggaccaaaaaccctacctgta
acagtcgataaacatggtaacttaacatttgatgcgatcgtgaagcaaaatgaaaacgct
tcaaagattgttcactcacagcacaaagatcttgtacccaagattctaaaggatgaagaa
gatgaagaagatgaagaggaagtggagaagcagaaaaagattgaagaaacaacccttcaa
acaaaagcagctctcgaaaagattgtgaatgtaagactaagtgcagcacaacccaaaaac
gttaccacacaatctcaagattcaaagttcatcaaatacaaaccctcacaacaatcatcc
gcgttcaactcaggggcaaaagagagaatcattagaatggtggaaatgccagttgaccca
ttggacccaccaaagttcaaacacaaaagagtcccaaaagctaacgggtcgccacctgtc
cctgtcatgcattcccctcctagacccgtaacagtaaaagaccaacaagattggaaaatc
cctccatgtatttcaaactggaagaatccaaaagggtacacaattccacttgataaacgt
ttagcagcagatggaagagggcttcaagaggtacaaatcaatgataattttgccaaactt
tcagaagctttatatgtagctgaacaaaaagcaagagaagctgtttccatgaggtcaaaa
gtccaaaaggaaatgatgatgaaagaaaaagaaagaaaagaacaagaactccgcgcatta
gctcaaaaagcaagatccgaaagaaccgggaccgcaaccggaccacctcctgccgcccca
ccgccgcctccctccgggaagagcatgatggatgttgacgagagagaaccaagagaacca
agagaaacaagagagacaagagaggagagagaggagaggattcagagagagaagattcgg
gaggagaggaggagagagagggagagagagagaagactggaagcgaaagatgcagcaatg
gggaaaaagagtaagataacacgggacagagaccgtgacatcagcgagaaggtggcgctg
gggatggcgtcaggaggggcggcgcgtggtggtgaagtgatgtacgatcagcggttgttt
aatcaagagaaagggatggattcagggtttgggacagaggatcaatacaatgtttatgac
aaaggattgtttacagctcagcctactctctccaccttataccgccctaagaaggatgct
gatggtgagatgtatggtggggcggatgagcagattgagaagattaggaaaacggatcga
tttaaaccggataaagggttcacgggtgccaacgagaaagcgggtcccagggatagaccc
gttgagtttgaaaaagaagtcgctgaagaagcggatccatttggtttggatcagtttttg
acccaagtcaaaggagggaagaaggcgatggataaagttggaagcagtgggaccatgaaa
gcaagtggtggggcttctatgcgtgaagggtatgaaggttctggaaggagtcggattggg
tttgaaagggggcgatag

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