Lactuca sativa (garden lettuce): 111905350
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Entry
111905350 CDS
T05352
Name
(RefSeq) tubulin alpha-2 chain
KO
K07374
tubulin alpha
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04145
Phagosome
lsv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111905350
09142 Cell motility
04814 Motor proteins
111905350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111905350
03036 Chromosome and associated proteins [BR:
lsv03036
]
111905350
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111905350
04147 Exosome [BR:
lsv04147
]
111905350
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111905350
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
111905350
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
111905350
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111905350
Exosomal proteins of other body fluids (saliva and urine)
111905350
Exosomal proteins of colorectal cancer cells
111905350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
111905350
NCBI-ProteinID:
XP_052620585
LinkDB
All DBs
Position
6:54074452..54089537
Genome browser
AA seq
453 aa
AA seq
DB search
MREIVSIHVGQAGIQVGNSCWELYCLEHGIQSNGYMPTLGSRNITSSSEESNSFGTFFRE
GISGKYVPRAVFVDLEPTVIDEVRTGSYKKLFNPKNLISGKEDAANNFARGHYTVGKEVV
DQCLDRVRILADNCSNLQGFMIFNSVGGGTGSGLGSLLLQRLSNEYGKTQKIGFTIYPSP
KVSTSVVEPYNAVLSTHSLIEHTDIVVQLDNEAIYGICKRALDMEKPTYRNLNRLISQTI
SSLTTSLRFPGSMNVDISEFQTNLVPFPRIHFMLSSYAPVVSSMKAYHELISVPEITNAV
FDPSNMMAKCDPRRGKYMACCLMYSGDIAPKDVNTAVGAIKTKKTIRFVDWCPTGFKCGI
NNQAPSVVPDGDLAKVKRAVSMISNNTAVSEVFSMINHKFDVMFAKRAFVHWYVGEGMEE
GEFSEAREDLAALEKDYEEVLQDGMEEDEDQGY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatcgtaagcattcatgttgggcaagcaggaattcaagttgggaattcatgt
tgggagctttattgcctcgaacatggcattcaatctaatggttatatgcctacgctggga
tctagaaatattacctcatcaagcgaagagagcaattcctttggcaccttcttcagggaa
gggatctccgggaaatatgtcccaagagctgtatttgtcgaccttgaaccaacagtcatt
gatgaagtaagaaccggaagctacaagaaactattcaatcccaaaaatctcatctccggt
aaggaggatgccgccaataacttcgccagaggacattacaccgtcgggaaagaagttgtg
gatcagtgtttagatcgggtgagaatcttagcagacaattgcagtaatttgcaagggttt
atgatcttcaattctgtgggtggtggaactggctctggtttggggtcgttgctcttacaa
cgcttgtctaacgaatatggaaaaactcagaaaattgggttcacaatttatccatctccc
aaggtttcgacttcagttgtggagccttacaatgctgtgttatcgactcattcattgatt
gaacacacagacattgtcgtgcaactagacaacgaagccatatatgggatctgtaagaga
gcgttggatatggaaaagccaacttacaggaacttgaatcgattgatatctcaaacgatt
tcatctttaacaacttccttgaggtttcctggatccatgaatgttgacatttccgaattc
caaacgaatttagtcccattcccgcggattcacttcatgctttcatcatacgcaccagtg
gtttcatcgatgaaagcctaccacgagctgatttcagttccagaaatcactaacgccgtg
tttgatccgtcgaatatgatggcgaagtgcgatccacggcgggggaaatacatggcttgt
tgcttaatgtatagtggagacattgctccaaaagatgttaacacggccgtcggagccatc
aaaaccaaaaaaacgattcgatttgtcgattggtgtccgacgggattcaagtgcgggatc
aacaaccaggctccatcggtggttcctgacggagatctggcgaaggtgaaacgagcagtg
agtatgatcagcaacaacacggcggtgtcggaggttttcagtatgatcaatcataaattc
gatgttatgttcgcgaaacgagcattcgttcattggtatgtcggtgaagggatggaagaa
ggcgagttctcggaggcgcgtgaagatcttgcagctctggagaaagattacgaggaagtg
ttgcaagatggcatggaagaagatgaggaccaaggatattag
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