Lactuca sativa (garden lettuce): 111905370
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Entry
111905370 CDS
T05352
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111905370
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111905370
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111905370
Peptidases and inhibitors [BR:
lsv01002
]
Cysteine peptidases
Family C85
111905370
Ubiquitin system [BR:
lsv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
111905370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
PKI
Motif
Other DBs
NCBI-GeneID:
111905370
NCBI-ProteinID:
XP_023756831
LinkDB
All DBs
Position
6:complement(54723369..54727402)
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AA seq
517 aa
AA seq
DB search
MTRVFVQRGSSAAGPSSSSNNTNRSSSSSSSSLPQAQVTGDDVQEQILSEDLPVETVEID
RNDGLDVPTTDKSEDETVSEDLSKRIGGLRVNEEEEEKDVKKSDDYPSQPTSGSPSPHPH
PPPPPAPPTPPPKPSSTGSNSRRFTPGNSAALRIGSSRRATAWPVVSTGSPRSHPENDGY
NSADEQNPCFGSSYDDAVSSSRFTHFKELNNNQTNTERERQFEIDIRRTQGYEVKRMSED
GNCLFRAVADQVYGDSEAYDLARQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGN
NVEIQALSEMYNRPIHIYSYSTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTI
GAGLGFSCLQGTNVDKDQVKAAIKAQQDQQIDNALMAEARFCSDMELTEKEIEHMVMAAS
RAEYMANDKFKQQLGQTESSTSDAQPSSSGGSITGGPSGSESKGEGTVLCNGMQMVLSMG
FSYVQAMEAYSIFGDDVDSMVCYLLETSSRRKGKATE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgtttttgttcagagaggttcttctgccgctgggccttcttcatcatctaat
aatacaaacaggtcgagttcttcgtcttcatcgagtctacctcaggctcaggttacaggg
gacgacgtccaagaacaaattctttctgaagatcttcctgtagaaactgttgaaattgat
cgaaacgatggtcttgatgtacccactactgataaaagcgaagacgaaactgtttcagaa
gatctttcgaaaagaatcggtggcttgcgagtaaacgaagaggaagaagagaaagatgta
aaaaagtccgatgattatccttcgcaaccaaccagcggaagtccaagtccacatccacat
ccacctccaccacctgctccgcctactccacccccaaaaccatcttcaacaggttctaat
tcccggagatttacgcctggtaattctgccgctttacgaattggttcatctagaagagcc
actgcttggccagttgtttccaccggatctccgaggtctcatcctgaaaacgatggctac
aacagcgctgatgaacaaaacccatgcttcggatcctcatatgatgatgctgtgagttct
agtcgttttactcacttcaaagaactgaataataatcagactaatacggaaagggagcga
cagtttgagattgatattagacgcacacaaggttatgaagtgaaaagaatgtcagaagat
gggaattgtctgtttcgtgctgttgcagatcaagtttatggtgattctgaagcatacgat
ttggctaggcaaatgtgcattgattacatggaacgcgagagagaccacttctcacagttt
ataacagagggtttcacttcttattgcaagagaaagagaagagataaagtctatgggaac
aatgtagagattcaagcattatctgaaatgtacaatcggcctattcatatctactcatat
agcactgagcctataaatatattccatggaagctataacacagatacacctccaatccgg
ctaagttaccatcatggcaaccattacaactctcttgttgatccacgtaggctcacaata
ggtgctggccttgggtttagctgcctgcaagggacaaatgttgataaagatcaagtgaaa
gcagcaatcaaagctcaacaagatcaacagattgataatgctcttatggcagaggcgcgt
ttctgctcagatatggagttgactgagaaggaaatcgagcatatggtgatggctgcatcg
agggctgaatacatggcaaatgataagttcaaacagcaacttggtcaaacagaatcttct
acgtctgatgctcaaccatcctcttctggaggtagtattacaggtgggccatcagggagt
gagagcaaaggcgaaggaacagtgctgtgtaatggaatgcagatggtgctgtcaatgggg
ttcagttatgtgcaggcgatggaggcgtatagtatatttggtgatgacgtggattccatg
gtttgttatcttcttgaaactagcagcaggcgtaaagggaaagcaactgaataa
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