KEGG   Lactuca sativa (garden lettuce): 111905395
Entry
111905395         CDS       T05352                                 
Name
(RefSeq) protein HIRA
  KO
K11293  protein HIRA/HIR1
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsv03036]
    111905395
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     111905395
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N WDR55 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st DUF3375 Vps16_N R3H-assoc PALB2_WD40
Other DBs
NCBI-GeneID: 111905395
NCBI-ProteinID: XP_023756862
LinkDB
Position
6:56536119..56543634
AA seq 1031 aa
MIAEKPNWVKHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNMKYVAKILHLDPDKSKLEL
LATLRDHFGSVNCVRWAKHGRYIASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKIA
STLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWDVTNGICTAVLRGHSSLVKGVTWDPI
GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWSKSLGSTFFRRLGWSPCGHFITTTHGFQK
PRHSAPVLERGEWTATFDFLGHNAPIIVVKFNHSMFKRNPTNTLDGKATSGGWANGFSKN
NGKESQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLD
GTVATFHFEVKELGHRLTEIELEELKKSRYGDVIIRQSNLAESPAQLLLEAASKKVTGAT
TNHNTSTIKSSSSPIIPSKASESLHELDNTNTNTTTNTNTNNININISSSTIKPSPRVSS
PVKQREYRRPDGRKRIIPEAVRVPENIPQTVDFSTKSTENNGVLIHDSGFREGPPSKRAM
VGVGVGVGPVDVRERSGVAARATVSESLVIEKVSPLNDKDGNISVEQIGGVKKLGSLKGI
SIRVFSKEGGESPHVCLEARPKEHAPNDLVGVGMSFTMKETEISCTKNGQMIWSDRISGN
VTVLAGNANFWAVGCEDGSLQVYTKCGRRSMPTMMMGSTPVFIDCDESWKLLLVTRKGAL
YVWDLFNRKCILHDSLTSLMASDPKSTGTVKVISAKLSKSGSPLVTLATRHAFMFDMNLM
CWLRVADDCFPASNFASSFNLGFPQNGELAALQVDVRKFLARKPGWSRVTDDGVQTRAHL
ESQLASALSLKSPNEYRQCLLSYIRFLAREADESRLREVCENFLGPPTGMAESATNSSWD
PCVLGMKKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYKTTTTTTNLQPPTTTTTGNT
NSPQPLPDQTATEPPMTNQVAQDSGSQPMDEEQPGNNSNPAASDQMDVDPPGIEKTDAVL
IPTPVADEMAS
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgattgcagaaaaaccaaattgggttaaacatgaaggcatgcaaatcttctcaattgat
atacagcctggagggcttagatttgccactggcggtggcgatcacaaggtaaggatttgg
aacatgaaatacgttgccaaaatcctgcacttggatccagataaatcaaagttagaactt
cttgctacacttcgtgatcattttggatctgtgaattgtgttagatgggccaaacatgga
agatacattgcatcaggttcagatgatcaagtaattcaaatacatgaaagaaaacctggt
tctggaaccactgaatttggtagtggtgaggcacctgatgttgaaaactggaaaatcgcc
tccactttaagaggacatactgcagatgtggtggatctaaattggtcaccagatgattca
actttagccagtgggagtttggataacactattcatatatgggatgtgaccaatgggatt
tgcacagctgttttaaggggtcactctagtcttgttaaaggggtaacttgggatcccatt
ggctcatttatagcaagtcaatcggatgacaaaactgtaattatttggcgaacatctgat
tggagtcttgcacatagaacagatggacattggtcaaaatcgcttggatccactttcttc
aggcgactagggtggtctccttgtggtcatttcataacaacaacacacggttttcaaaaa
ccaaggcattcggcacctgttctagagaggggagagtggactgcaacctttgacttttta
ggacacaacgcccctattattgtggtgaagtttaatcactctatgtttaaaagaaatcca
acaaatacccttgatggaaaagctacttcgggtggatgggctaatggtttttcaaaaaat
aatggaaaagaatcacaaccgtataatgttattgcaataggaagtcaagatcgaaccatt
actgtgtggactactgcaagtgctcgccctttattcgttgccaaacacttcttttctcaa
agtgttgtggatttatcttggagcccagatggatattccctatttgcatgttctttagat
ggaacagttgctacttttcactttgaggtcaaagaactgggtcataggttgactgaaatc
gaattagaagaattgaaaaaaagccgatatggtgatgtcatcatccgccaatcaaattta
gcagaatctcccgcccaattactcctcgaagccgcctccaaaaaggtcaccggagccacc
acaaaccacaacacctccaccatcaaatcatcatcttctccaataattccatcaaaagca
tccgaatctttacatgaacttgataacactaacaccaacacaaccacaaacacaaacacc
aacaacatcaatatcaatatttcttcatccaccattaaaccttctccccgagtttcaagc
ccagtgaagcaaagagaatacaggcgacccgatggaaggaaacggatcattccggaagct
gttagagtcccagaaaacatccctcaaacggttgacttctccacaaagtcaaccgaaaat
aatggtgtacttatacatgactcagggtttcgagaggggcctcctagtaaaagagcaatg
gtgggagtgggagtgggagtgggacccgttgatgtgagggagcgatctggtgtggctgca
cgtgctactgttagtgagagtcttgtgattgaaaaggtgtcacctttaaatgataaagat
gggaatattagtgttgaacaaattggaggtgtgaaaaagttgggatctttgaaaggtatt
tcgataagggtgtttagtaaagagggaggtgagtcaccacatgtttgtttggaagctcga
cctaaagaacatgcaccaaatgaccttgtaggggtaggaatgtcatttactatgaaagaa
acagaaatttcttgcacgaaaaatggtcaaatgatttggtctgatcgaatttctgggaat
gtcacggttttggcgggaaatgcaaatttttgggctgttggttgtgaagatggttctctt
caggtttacacaaaatgtgggagaagatctatgccaactatgatgatggggtccacaccc
gtgttcattgattgtgatgaatcttggaagttgttgcttgttacaagaaaaggggcatta
tatgtgtgggatctttttaatcgaaaatgtatccttcatgattcattgacctcacttatg
gcttctgacccaaagtcaacgggcacagttaaagtgatatccgcaaagctttcaaaatct
ggatcgccacttgtcactctagcaacgcgccacgcgttcatgtttgacatgaacctcatg
tgttggctacgtgttgcggacgattgcttccctgcttccaattttgcaagttcattcaat
ttagggttcccccaaaacggtgaattggcagctttgcaagtcgatgtcagaaagttttta
gccagaaagcctggctggagcagagtgacggacgatggagtgcagacacgcgctcacttg
gaatctcagttggcgtctgcattatccttaaagtctccaaatgagtatcgacagtgtctc
ctttcgtatatacgttttcttgctagagaagctgatgagtcacgactacgtgaagtgtgt
gaaaattttcttggacctccaacaggaatggcagaatctgcaacaaattcatcatgggat
ccttgtgttcttggaatgaagaaacataaacttctcagagaagatattcttccagcaatg
gcatcaaatcgaaaagttcaacggttgcttaacgagttcatggatcttttatctgaatac
aaaaccaccaccaccaccacaaatcttcaacctcccaccaccaccaccaccggaaacaca
aactcaccacaaccgttgccggatcaaaccgccactgaaccaccaatgacaaatcaagtg
gctcaagattcaggctcacaacccatggatgaagaacaaccagggaacaacagcaatcca
gctgcttctgatcaaatggatgtggacccacctggaattgaaaaaaccgatgcagtcttg
attccgactccggtggctgatgaaatggcatcttga

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