Lactuca sativa (garden lettuce): 111905464
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Entry
111905464 CDS
T05352
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Module
lsv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111905464
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111905464
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
111905464
NCBI-ProteinID:
XP_023756921
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Position
6:55316760..55318437
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AA seq
393 aa
AA seq
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MVTKLNIVPVLMIFLLFQYSYSAKVTYNVLSFGAKANGRLDSRSAFLKAWGLACNSTNPA
IIYVPIGRYLIGSAITFSGQTCKSKAITMKIDGTLVAPSTYNAVGNAQVWIKFYRTNHVT
ISGGTLDAQGSSLWACKSSGKTCPKGATTLGIYHSQNIVISNLRSLNSQMFHILLYACTN
AKLQGVSISAPGLSPNTDGIHLSSSTGVTILNSKISTGDDCISIGPGNSNIWIEKVVCGP
GHGISIGSLGWDVIEAGVQNVTVKTATFIGSDNGLRIKTWARRSNGFVKDVVFQHASMVN
VKNPILIDANYCPNNENCPNQVSGVKISNVLYEDVHGTSATRVAVKFDCRKGKPCTNIRL
KDVNLKYAGQPAVSSCSFAAGTASGLLQPTSCL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccaaactaaatattgttccagtcttgatgattttcctcctctttcagtactca
tattcagcaaaggtaacatataacgtcctaagttttggagccaaagccaatgggcgctta
gactcaagaagtgcattcctaaaagcatggggtttggcctgtaattcaacaaatcccgcc
atcatctatgtacccattggcaggtacttgattggttctgcaatcacattctccggccaa
acatgtaagagcaaagccatcacaatgaagatagatggtactttggtggctccctcaacg
tataatgctgtaggcaacgcccaagtttggattaagttttaccggactaaccatgttaca
atctccggtggaacccttgatgcccaaggttcttctctatgggcctgcaaatcctctgga
aagacatgtcctaaaggagctacgacacttggcatctaccattcccaaaacatagtgatc
agtaatttaaggtcattaaacagccaaatgttccacatcctgttatatgcatgcaccaat
gccaagctacaaggggtgagcatctcagcacccgggctcagcccaaacacagatggtatc
catttatcatcttccacaggcgtcactatcttgaattctaagatctccacaggggacgac
tgcatctccattggccctggcaattctaacatctggatagagaaggtggtttgtggcccc
ggtcatggcatcagcatcgggagtctaggttgggacgttatagaagcgggtgttcagaat
gttactgtaaaaactgcgacatttataggtagtgacaatggtttaaggataaagacatgg
gcaagacgtagcaatggattcgtgaaggatgttgttttccagcatgcaagtatggtgaac
gtaaaaaatccgatactaatagatgcaaattactgcccaaacaatgagaattgcccgaat
caggtttcaggagtaaagatcagcaacgtgctgtatgaggatgtacatggaacatcagca
acacgggtggcagtgaaatttgattgtagaaaggggaagccatgcactaatatcagacta
aaggatgttaacctaaaatatgcgggtcaaccagcagtctcctcttgctcctttgctgct
ggtactgcttctggattacttcaacctacaagttgtctctaa
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