Lactuca sativa (garden lettuce): 111905487
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Entry
111905487 CDS
T05352
Name
(RefSeq) eukaryotic initiation factor 4A-15
KO
K03257
translation initiation factor 4A
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111905487
03012 Translation factors [BR:
lsv03012
]
111905487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111905487
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111905487
mRNA cycle factors
Stress granule specific factors
111905487
Translation factors [BR:
lsv03012
]
Eukaryotic type
Initiation factors
eIF-4
111905487
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111905487
Exosomal proteins of bladder cancer cells
111905487
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
111905487
NCBI-ProteinID:
XP_023756941
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All DBs
Position
7:51816417..51819011
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AA seq
413 aa
AA seq
DB search
MAGVAAEGSQFDTRQFDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYNVVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRS
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKVQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTLEDEKMLSDIQKFYNVVVEELPSNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttgcagcagaaggatctcagtttgatactcgtcaatttgacaccaagatg
aacgaattgctttcaactgatggacaagacttctttacatcatacgatgaagtctatgac
agctttgatgccatgggtttacaagaaaaccttttaagaggcatctatgcatatggtttt
gagaaaccatctgcaattcaacaaaggggaattgtccccttcactaagggcctagatgta
attcaacaagctcaatctggaactggaaagacagcaactttttgctctggaatccttcaa
caacttgactacaatgtagtcgaatgccaagccttggttttggcacctacccgtgaactt
gctcaacagattgaaaaagtcatgcgtgcccttggtgactaccttggtgtcaaagtccat
gcttgtgtaggtgggaccagtgtacgtgaggaccagaggattctctcagctggggtccat
gttgttgtggggacacctggacgtgtgtttgacatgctgcgcagacagtctctaaggtct
gactacattaagatgtttgttcttgatgaagctgatgaaatgctctcaaggggtttcaaa
gatcagatttatgacatcttccagttgcttccaccaaaggttcaagttggggtgttctct
gcaacaatgccaccagaggcacttgagatcacaagaaagttcatgaacaaaccagtgagg
attcttgtgaaaagagatgagttaaccctagaaggaatcaaacagttctatgtgaatgtt
gaaaaggaagattggaaactcgaaacactctgtgatctttatgagaccctagcaatcact
caaagtgtcatctttgtgaacactcgtcgaaaggttgactggttgactgacaagatgaga
agccgggaccacacagtgtcagccactcatggtgacatggatcagaacacgcgtgacata
atcatgcgggagtttcgttcaggatcttcacgtgtcttgatcactacagaccttttggcc
aggggtattgatgtccaacaggtttcacttgttatcaactatgaccttcctacccaacca
gaaaactaccttcacaggattggaagaagtggaaggtttggaagaaagggtgttgccatt
aactttgtgaccttggaggatgagaagatgctttctgatattcagaagttttacaatgtg
gttgttgaggagctgccttcaaatgttgctgatttgatttga
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