Lactuca sativa (garden lettuce): 111905501
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Entry
111905501 CDS
T05352
Symbol
CNBT1
Name
(RefSeq) cyclic nucleotide-binding transporter 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111905501 (CNBT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111905501 (CNBT1)
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111905501 (CNBT1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111905501
NCBI-ProteinID:
XP_023756949
LinkDB
All DBs
Position
2:48847686..48854383
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AA seq
750 aa
AA seq
DB search
MDSIEKDDIPILTATDWPLSDYNPNPRFSQRNRSVSISIPVTSIELNSNSTSRVGFTGSL
RSERNTHDEHTQERKPVEQEDSGNYNHELGDFNSEAKNEHLFRSGRLGMCNDPYCTTCPP
FYKAKPILRVAQGFDHHFDNVIYGGVKGWAQGKLLLLKHFTFGIMNPHAKVVQQWNQFIV
ISCLVAIFIDPLFFYLLLVNKEFKCILINWPMTKTMVAFRSMTDFIYLLHMLLQFRLAFI
SPESRVVGAGDLVDHPKKIALHYLSGFFFLDLFIVLPVPQIIVLLILPHAIASSGANYAK
NLLRSAILVQYIPRLYRFLPLLAGQSPSGFIFESAWINFFINLLTFVLAGHVVGSSWYLL
GLQRVNQCLRDACHNSGIENCTKFIDCGHGNDTLAFEVDQQWNNWKQNENASACFTEDGF
PYGIYVKAVNLTAENNIITRYVYSFFWGFQQISTLAGNQTPSYFVWEVLFTMGIIGLGLL
LFALLIGNMQNFLQGLGRRRLEMSLRRRDVEQWMSHRHLPASLRRKIRESERYNWAATRG
VNEERLMENFPEDLQRDIRRHLFKFVKKVRIFSLMDEPILDAICERLRQKTYIKGGKILY
KGGVVAKMVFIVRGKMESIGEDGNKVSLSEGDVCGEELLKWCLEHSYVNGDTQNHRKQGF
RLFSNRTVRCLTNVEAFVLRAADLEEVTTLFAGFLRNHRVQFAIRNESPYWRGLAATTIQ
VAWRYRKKRLSREQTSTRPSKASLHKRLSF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggactctattgaaaaagatgatataccaattttaacagctacggattggccattatct
gattacaatccaaatccaagattttcacaaaggaacagaagtgtttcaatatccattcca
gtgacctccattgaattgaattccaattcaacaagtcgtgttggatttacaggttccttg
cgtagtgaaagaaacactcatgatgaacatacacaagagaggaagccagtggaacaagaa
gattctggaaactataaccatgaactgggagattttaatagtgaagcaaaaaatgagcat
ttattcaggtcaggaagattggggatgtgcaatgatccttattgtacaacatgcccacct
ttttacaaagcaaagccgatcttaagagttgcccaagggtttgatcaccattttgataat
gttatatatggaggtgtcaaggggtgggcacaaggaaagttattgttactaaaacatttt
acatttgggatcatgaatccacatgccaaagttgttcaacagtggaaccagttcattgtc
atatcttgcttagttgccattttcatagaccccttattcttttacttgttgttggtgaat
aaggagttcaagtgcatattaattaattggccaatgacaaaaaccatggtggctttcaga
agcatgaccgactttatatacctcttgcatatgcttcttcagttcaggttagcattcatt
tcacctgaatcaagagttgtaggtgctggagacttggttgatcatcctaagaagatcgcg
ttacattatctttctggatttttctttcttgacttatttatcgtattaccagttcctcag
ataattgtattacttattctaccacatgccattgcatcatcaggagctaactatgcaaag
aatcttttgcgatcagctattcttgttcaatacattccaagattataccggtttttgcct
cttcttgctggacaatctccaagtggtttcatatttgagtctgcatggattaactttttc
attaatcttttgacttttgtcttggctggtcatgttgttggttcatcctggtatctgtta
gggttacagagggtgaatcaatgccttcgagacgcttgtcataattctggaatcgagaat
tgcacaaagtttatagattgtggacatgggaatgatactctcgcctttgaagttgatcaa
caatggaataactggaaacagaatgaaaatgcaagtgcttgttttaccgaagatggcttc
ccttatggaatttacgtgaaagctgtcaatctcacagccgaaaataatataatcacaaga
tatgtctactcatttttttgggggtttcagcaaatcagcacattggcgggcaatcaaact
ccaagttattttgtgtgggaagtcctttttacgatgggtataattgggcttggactttta
ctttttgccctccttattggaaacatgcagaactttcttcaaggtctgggacgcagacga
ctggaaatgtcacttagacgacgtgatgttgagcagtggatgagccatagacacttgcct
gcaagcctacgaagaaaaattcgagaatcagaacgctataattgggcagctacccgaggt
gttaatgaagaaaggctaatggagaattttcctgaagacttgcaaagagatatacgtcga
catctttttaagtttgtcaagaaagttcgcattttctcgctcatggatgaacccatttta
gatgcaatatgtgaaaggttaagacaaaagacatacatcaaaggtgggaaaattttatat
aaaggtggggttgtggcaaaaatggtttttattgtaagagggaagatggagagcattgga
gaagatgggaataaagtttcattgtcggaaggtgatgtatgtggtgaagaacttctcaaa
tggtgtcttgaacattcctatgttaatggagatactcaaaaccatagaaaacaaggattc
agattgtttagcaacaggacagtgagatgcctaacaaatgtggaggcatttgttcttcgg
gctgcagatcttgaagaagtaaccactctttttgctggattcttgaggaatcatcgcgtt
cagtttgccattaggaatgaatctccatactggcggggtttggcggcaaccaccatccag
gtggcatggagatacaggaagaagcggctaagccgtgaacaaacctcaactcgtccatcc
aaggcgagtcttcataagagactttctttttag
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