Lactuca sativa (garden lettuce): 111905529
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Entry
111905529 CDS
T05352
Symbol
LOC111905529
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111905529 (LOC111905529)
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
111905529 (LOC111905529)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Lar_restr_allev
Zn_ribbon_tTFIIB
BRF2-like_C_cyclin_rpt
TFIIB_C_1
MmgE_PrpD_N
Motif
Other DBs
NCBI-GeneID:
111905529
NCBI-ProteinID:
XP_023756982
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All DBs
Position
1:233307743..233313601
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AA seq
576 aa
AA seq
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MTWCPHCAKNSETHRDYTTGSVCCVDCGKVVSQDLYTEDVTFVKDAGGGAHLAGNLVKMG
SACSESHRRTLEKGNVIIYELIDKYGISNVTHATKYYEIAVERGFTRGRRTNQVAAACLY
VACREKEKPFLLIEFSSELGVSVYELGTVYLLLCKLLSLQDHPFVQKPVDPSLFMHRYTS
GLIKGDGSKQVLNTALHLAVSMKRDWIQTGRKPSGICAAAIYVSSVLHGHNFSRADVVKT
VHICEATLQKRLIEFENTEAGSLSIDEFTNKAKEYEKEMQSCKQSSNELKMPELNEVVCQ
HKSNAVQSGFGLCKDCYLEFCGGLYGSEPPAFQRAELERLANQSVDENDKGSLTEPQCAS
PSLGKVENVGDTQETSESQKDDPAPAASVDETDTLSDIDDSEVSCYLNNEEESRFKKIIW
EQMNKEYMQEQAAKEAAAAAARKLYTGTSEEIREAQALAAAAAEAVASKREKDKKRRALE
AKNAKPAQSAAEAASQLFTKKKLSSKINYDAMNSLFDDEPSPKKNRVEDDDNGKGEELGK
GDDGEGEEDNNDEWNYEQEMSGYEYDYDANEYDEEY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtgtcctcattgtgcaaaaaacagtgagacacatcgtgattataccacagga
agcgtatgttgtgttgattgtgggaaagtagtatctcaagatctatacacagaagatgtc
acttttgttaaagatgcaggaggaggggctcatcttgcaggaaaccttgtcaaaatggga
agtgcttgttcagagtcacacagaagaaccttggagaaagggaatgtgataatatatgag
ctgatagacaaatatgggattagcaatgtcacacatgccaccaaatattatgagatagct
gttgaacgtggttttacaagagggcgtagaacaaatcaagttgcagctgcttgcctttat
gttgcctgtagggaaaaagagaaaccatttctgcttattgaattttccagtgaattgggt
gttagtgtgtatgaattgggaactgtttatttactactttgcaagctattaagcctccaa
gatcatccttttgttcaaaaaccagttgaccctagtctttttatgcatagatacacaagt
ggactaattaaaggagatggaagtaagcaagttttgaacactgcattacaccttgcagtt
agcatgaaaagagactggattcagacagggagaaaacctagtgggatatgtgcagcagct
atatacgtgtcttctgtgttacatggccataatttttcaagagcagatgttgttaaaact
gtacatatatgtgaagcaacattgcaaaagagattgattgagtttgaaaatacagaagct
gggagtttatctattgatgagtttactaataaagcaaaggagtatgagaaggaaatgcaa
tcatgcaaacagagttctaatgagttaaagatgcctgaattgaatgaagttgtttgtcaa
cataaaagcaatgcagttcaatcaggttttgggctttgtaaagattgttatttggagttt
tgtggtggactttatggttcagagcctccagcttttcaaagggcagaattggaaagatta
gcaaatcaatctgtggatgaaaatgataaaggctctttaacagagccccaatgtgcttct
cccagccttggaaaagtggagaatgttggagacactcaagagacttctgaaagccaaaaa
gacgatcctgcccctgctgcttctgttgatgaaacagataccctttctgatattgatgat
tctgaggtgagctgctaccttaacaatgaggaagaaagccggtttaagaagataatatgg
gaacagatgaacaaagagtacatgcaggagcaagctgctaaagaagctgcagctgcagct
gcacgtaagctttatacaggaacttcagaggaaattcgggaagctcaggcacttgctgct
gctgcagctgaagctgttgctagcaaaagagagaaagacaaaaaaagacgagcattggaa
gctaagaatgctaagcctgcccaatccgctgcagaagctgctagtcaacttttcaccaag
aagaagctaagttcaaaaatcaattatgatgcaatgaacagtctctttgatgatgagccg
agtccgaaaaagaaccgtgttgaggatgatgataatgggaagggggaagaattaggaaag
ggagatgatggggagggagaagaagataataatgatgaatggaactatgaacaagaaatg
agtggttatgagtatgattatgatgccaatgaatatgatgaagagtattga
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