Lactuca sativa (garden lettuce): 111905614
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Entry
111905614 CDS
T05352
Name
(RefSeq) protein transport protein Sec24-like CEF
KO
K14007
protein transport protein SEC24
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111905614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111905614
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111905614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
111905614
NCBI-ProteinID:
XP_052621536
LinkDB
All DBs
Position
7:complement(53103237..53109234)
Genome browser
AA seq
1051 aa
AA seq
DB search
MATPGGPRPGNLPPNYNPNSIANNMQNLQINRPNQPPNSGGGPRGPPPPFGHQPRPQPFP
SSPFPGAPPPGVVPRGAMPPPSGPPQAALPPFMASNRPTGGGPPGSNQPPPSSSRPMAPP
GLRPGPFATSPGGGPGPGGPLSNGPPAFGPVGMQGGPTNPPRPLGGPPPPRQTMPPGPSL
LGQSMHSGIGSQSMNALPRPVQPAPPFSAPPPGGIPPPFSSQGQGIPPFGSQPWQMQSRQ
NMPPGPPPPTSGSPQPPRMFGMQPSLPNQQSMATISPTMGPTVGTGPSRIDPNQIPRPIP
SSSILLHETRQGNQANPPPPASSEFIARDTGNCSPRYMRCTINQIPCTSDLLTTSGMPLA
LLVQPLALPHPSEEPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGKRFICNLCGFTDET
PREYQCNLGPDGRRRDADERPELCRGTVEFVATREFLVREPMPAVFFFLVDVSMNAIQTG
ATAGACSAISRVVADLPEGPQTLVGIATFDSTIHFYNLKRALQQPLMFLVPDIHDVYTPL
PSDVVVQLSECRQHLDLLLESIPTMFQNNKTADSAFGAGMKGAFLAMKNTGGKLLVFQSV
LPSAGIGALSAREAEGRSNISSGEKEPHKLLQPVDRTLKTMAIEFAEYQVSVDVFITTQS
YVDIASVSVVPRTTGGQVYYYHPFSALSDPAKLYNDLRWNVTRPQGFEAVMRVRCSQAVQ
VEEYFGNFCKRIPTDIDLPAIDCDKTIMVTLKHDDKLQDGTECAFQCALLYTSVYGQRRI
RVSTLSLPCTTMLSNLFRSADLDTQFSCFLKQAAIEIPSSPLVQVREQVTNLCINILHSY
RKFCATVSSSGQLILPEALKLLPLYTLALIKSIGLRSDGRIDERSFWINYVLPLSTQLAI
PLVYPRMISIHDLNSKETDGCVIPHAIPLCSEHVSDDGIYLLENGEDCLVYIGNSVDPDI
IRKLFGVSSLDEIPTQFVLQQYGNPLSKKLNEVINEIRSQRCNYLRMKLCKKGDQSGMLF
FSYMVEDKSPNGLSYVEFLVHVHRQIQSKMN
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccggtggacctagacccggtaatctcccgcctaattataaccctaattcg
attgccaataacatgcaaaacctgcaaatcaatcgccctaatcagccaccaaattccggt
ggtggacctagaggtccgcctcccccttttggacaccaaccccgaccacaaccttttcct
tcatccccgtttcccggagcaccaccacctggtgttgttcctagaggtgcaatgccacca
cctagtggaccaccgcaagctgcattgccacctttcatggcctctaatcgaccaactggt
ggtggtcctcctggtagtaaccaacctcctccatcttcttcaagaccaatggctcctcca
ggtcttcgtccaggtccctttgcaacctcccctggtggtggacctggacctggtggtcca
ttgagtaatggaccgccagcttttggaccagttggcatgcaaggtggtcctaccaaccct
ccaagaccattaggaggacctccaccacctcgacaaaccatgccacctggtccttccctt
ttggggcaaagtatgcattcaggcattggaagccagtccatgaatgcattaccaaggcca
gtacaaccagctccacctttttcagcaccacctccaggtggcatacctcctcctttttca
tcccagggtcaaggtatacctccatttggatctcaaccatggcaaatgcaatctcgtcaa
aacatgccacctggcccacctccacctacctctggctctcctcaacctcccagaatgttt
gggatgcaaccatcacttccaaatcaacaatcaatggctacaatatcacccaccatgggc
cccactgtaggcacaggaccttcaagaattgaccctaaccaaatcccccgccctattcca
tcttcctctatacttttacacgaaacccgccaaggaaatcaagccaatcctccaccgcct
gcttcaagtgaattcattgcaagggatactggaaattgtagtccaaggtacatgaggtgt
acaattaatcagattccatgcacttctgatctattgaccacatccgggatgccattggct
ttattggtgcaacccttagccctccctcatccatctgaggagcctattcaagtagttgat
tttggtgaaagtgggccagttcgatgttcacgttgcaaaggttacattaatccattcatg
aagtttattgatcaaggaaaacgatttatctgtaacctctgtggttttacggatgaaact
ccccgtgaatatcagtgtaatttaggtccagatggaagaaggagagatgctgatgaaagg
cctgagttatgtagaggaacagttgaatttgttgctacaagagaatttctggttcgggaa
ccaatgccagctgtctttttctttcttgttgatgtatcaatgaatgcaatacaaacaggt
gctacagctggagcttgtagtgctattagtcgagttgttgctgatcttccagagggtcct
cagacacttgtgggaattgctacatttgactcaactatccatttttataatctgaaacgc
gctttgcaacagccattgatgttcttagtgccagacatacatgatgtttacactcctctt
ccttcagatgtcgttgttcaactttctgagtgtcgtcagcatctagatttgttgctggaa
agcatcccaactatgtttcagaataataaaacagctgattcagcttttggtgctggaatg
aagggtgcttttttggcaatgaagaatactggaggaaaacttttggtatttcaatcagtc
ttgccttctgctggaattggagctctttctgctagagaagcagaaggaagaagtaatata
tcttcaggagaaaaggaacctcataaattacttcaaccagttgacaggactttaaagaca
atggctattgaatttgcagagtaccaggtttctgttgatgtatttataacaacacaaagt
tatgtggacattgcttcagtttccgttgttccaaggacaactggaggacaggtgtactat
tatcaccctttttctgctctctctgatcccgcaaaactttataatgatcttcgatggaat
gtcacaagacctcaaggttttgaagcagtaatgcgtgtcagatgcagccaggctgttcaa
gtagaagaatactttggtaacttctgcaaacgcattcctacagacattgatctgcctgcg
attgattgtgacaaaacgataatggtaaccttaaaacatgatgataaattgcaagatggc
acagaatgtgcttttcagtgtgcgcttttatatacaagtgtatatgggcaacgaagaata
cgagtatccaccttatctttaccatgtacaaccatgctcagtaatcttttccgctctgct
gacctggacacccaattttcatgttttttaaaacaagctgcaattgaaatcccttcaagc
ccattagtgcaagtaagggagcaagtgacaaatctttgcatcaacattcttcattcttat
cgcaaattttgtgccaccgtgtcatcgtcaggacagctcatacttccagaagcactcaag
cttttgcctctgtacactctcgctttgattaaaagtattgggttgcgaagtgatgggcgt
attgatgagagatcgttttggattaattatgttcttcctttgtctactcaattggcaatc
cctcttgtgtacccaaggatgataagcatccatgaccttaattcaaaggaaacagatgga
tgtgtgattcctcatgcgattcccctgtgtagtgaacatgtgagtgatgatggaatctat
cttcttgaaaatggtgaagattgtttagtttatattggaaactctgtagatcctgatata
attcgcaaactctttggcgtttcttcgcttgatgaaattcctacccagtttgtgttacaa
cagtatggtaatcctttgtcaaagaagctaaatgaggttataaatgaaataagaagccaa
agatgtaactaccttcgcatgaaattatgcaagaaaggagatcaatcaggaatgttgttc
ttttcgtatatggtggaagacaagtctccaaatggtctatcatatgttgagtttcttgtg
catgttcatcgacaaattcaaagcaaaatgaattga
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